DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tpc1 and Slc25a19

DIOPT Version :9

Sequence 1:NP_650034.1 Gene:Tpc1 / 41316 FlyBaseID:FBgn0037852 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001007675.1 Gene:Slc25a19 / 303676 RGDID:1359554 Length:318 Species:Rattus norvegicus


Alignment Length:307 Identity:124/307 - (40%)
Similarity:172/307 - (56%) Gaps:20/307 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 TREQLHQMLAGGLSAAITRSTCQPLDVLKIRFQLQVE---PLGKNAAKEGPGALTSKYTSIGQAV 86
            :..:|...:||.:|..:||:...||||:|||||||:|   |...||          ||..|.||.
  Rat    12 SNSKLEVAVAGSVSGFVTRALISPLDVIKIRFQLQLERVCPSDPNA----------KYHGILQAA 66

  Fly    87 KTIYREEGMLAFWKGHNPAQVLSIMYGICQFWTYEQLSLMAKQTSYLADHQHLSNFLCGAAAGGA 151
            |.|.:|||..||||||.|||:|||.||..||..:|:|:.:..|.:....||..::|:||..:.|.
  Rat    67 KQILQEEGPRAFWKGHVPAQILSIGYGAVQFLAFEELTELLYQANLYQTHQFSAHFVCGGLSAGT 131

  Fly   152 AVIISTPLDVIRTRLIAQDTSKGYRNATRAVSAIVRQEGPRGMYRGLSSALLQITPLMGTNFMAY 216
            |.:...|:||:||||.||...|.|.|...|:..:.|.|||...|:||:..::.|.|..|..|..|
  Rat   132 ATLTVHPVDVLRTRLAAQGEPKIYSNLREAIRTMYRTEGPFVFYKGLTPTVIAIFPYAGLQFSCY 196

  Fly   217 RLFS---DWACAFLEVSDRSQLPTWTLLGLGASSGMLSKTIVYPFDLIKKRLQIQGFESNRQTFG 278
            |...   ||    :...|..|......|..|..||::|||:.||.||.|||||::|||..|..||
  Rat   197 RSLKRAYDW----IMPPDGKQTGNLKNLLCGCGSGVISKTLTYPLDLFKKRLQVRGFEHARSAFG 257

  Fly   279 QTLQCHGVWDCLRLTVRQEGVRGLYKGVAPTLLKSSMTTALYFSIYD 325
            |.....|:.|..:..::.||.||.:||::|:|:|::::|...|..|:
  Rat   258 QVRSYRGLLDLAQQVLQHEGTRGFFKGLSPSLMKAALSTGFMFFWYE 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpc1NP_650034.1 Mito_carr 29..123 CDD:278578 48/96 (50%)
PTZ00169 33..329 CDD:240302 123/299 (41%)
Mito_carr 153..222 CDD:278578 26/71 (37%)
Mito_carr 233..328 CDD:278578 38/93 (41%)
Slc25a19NP_001007675.1 Mito_carr 16..108 CDD:278578 49/101 (49%)
Mito_carr 118..203 CDD:278578 31/84 (37%)
Mito_carr 212..311 CDD:278578 38/93 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336585
Domainoid 1 1.000 87 1.000 Domainoid score I7808
eggNOG 1 0.900 - - E1_KOG0752
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5982
Inparanoid 1 1.050 223 1.000 Inparanoid score I3433
OMA 1 1.010 - - QHG55227
OrthoDB 1 1.010 - - D1454699at2759
OrthoFinder 1 1.000 - - FOG0001923
OrthoInspector 1 1.000 - - mtm9127
orthoMCL 1 0.900 - - OOG6_103578
Panther 1 1.100 - - LDO PTHR24089
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2188
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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