DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tpc1 and Slc25a43

DIOPT Version :10

Sequence 1:NP_650034.1 Gene:Tpc1 / 41316 FlyBaseID:FBgn0037852 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001419807.1 Gene:Slc25a43 / 298318 RGDID:1559928 Length:329 Species:Rattus norvegicus


Alignment Length:313 Identity:79/313 - (25%)
Similarity:138/313 - (44%) Gaps:47/313 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QMLAGGLSAAITRSTCQPLDVLKIRFQLQVEPLGKNAAKEGPGALTSKYTSIGQAVKTIYREEGM 95
            :.|..||:.|.:.|...||::..:..|:              |.:.|....:....:.::..||.
  Rat    15 RFLCAGLAGAFSLSLTAPLELATVLAQV--------------GRVQSHSQGLWATGRRVWLSEGP 65

  Fly    96 LAFWKGHNPAQVLSIMYGICQFWTYEQLSLMAKQTSYLADHQHL---SNFLCGAAAGGAAVIIST 157
            .|.|||:..|.:......:.|...|.:..::     ::.|...:   |:.:.|:.||..:.|::.
  Rat    66 RALWKGNGVACLRLFPCSVVQLAAYRKFVVL-----FMDDLGRISQWSSIVAGSLAGMVSTIVTY 125

  Fly   158 PLDVIRTRLIAQD-TSKGYRNATRAVSAIVRQEGPRGMYRGLSSALLQITPLMGTNFMAY-RLFS 220
            |.|:|:||||.|: ....||....|:|.|.:|||...:|||.|..:|...|....:.:.| .|..
  Rat   126 PTDLIKTRLIVQNMLEPSYRGLIHALSTIYQQEGFLALYRGASLTVLGAVPFSAGSLLVYMNLEK 190

  Fly   221 DWACAFLEVSDR-SQLPTWTLLGLGASSGMLSKTIVYPFDLIKKRLQIQ-------GFESNRQTF 277
            .|.    ...|| |.|..:..:.:.|:   :|:.:.:|||.:|:::|.|       |        
  Rat   191 IWT----GPRDRFSHLQNFATVCVAAA---VSQAVSFPFDTVKRKMQAQSPYLPHYG-------- 240

  Fly   278 GQTLQCHGVWDCLRLTVRQEGVRGLYKGVAPTLLKSSMTTALYFSIYDKLKQV 330
            |..:...|..||.|..|:.:||.||:.|:...|||......:.|.:::..|::
  Rat   241 GVDIHFSGAVDCFRQIVKTQGVLGLWNGLTANLLKVVPYFGVMFGMFEFCKRI 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpc1NP_650034.1 Mito_carr 29..123 CDD:395101 19/91 (21%)
Mito_carr 153..222 CDD:395101 25/70 (36%)
Mito_carr 233..328 CDD:395101 26/101 (26%)
Slc25a43NP_001419807.1 PTZ00169 16..275 CDD:240302 75/292 (26%)

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