DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tpc1 and Slc25a43

DIOPT Version :9

Sequence 1:NP_650034.1 Gene:Tpc1 / 41316 FlyBaseID:FBgn0037852 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001078966.1 Gene:Slc25a43 / 194744 MGIID:2684854 Length:341 Species:Mus musculus


Alignment Length:313 Identity:80/313 - (25%)
Similarity:141/313 - (45%) Gaps:47/313 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QMLAGGLSAAITRSTCQPLDVLKIRFQLQVEPLGKNAAKEGPGALTSKYTSIGQAVKTIYREEGM 95
            ::|..||:.|.:.|...||::..:..|:              |.:.|....:....:.::..||.
Mouse    15 RLLCAGLAGAFSLSLTAPLELATVLAQV--------------GKVQSHSLGLWATGRRVWLSEGP 65

  Fly    96 LAFWKGHNPAQVLSIMYGICQFWTYEQLSLMAKQTSYLADHQHL---SNFLCGAAAGGAAVIIST 157
            .|.|||:..|.:......:.|...|.:..::     ::.|...:   |:.:.|:.||..:.|::.
Mouse    66 RALWKGNGVACLRLFPCSMVQLAAYRKFVVL-----FMDDLGRISQWSSIVTGSLAGMVSTIVTY 125

  Fly   158 PLDVIRTRLIAQDT-SKGYRNATRAVSAIVRQEGPRGMYRGLSSALLQITPLMGTNFMAY-RLFS 220
            |.|:|:|||:.|:. ...||....|.|.|.:|||...:|||:|..:|...|....:.:.| .|..
Mouse   126 PTDLIKTRLMVQNVLEPSYRGLIHAFSTIYQQEGFLALYRGVSLTVLGAVPFSAGSLLVYMNLEK 190

  Fly   221 DWACAFLEVSDR-SQLPTWTLLGLGASSGMLSKTIVYPFDLIKKRLQIQ-------GFESNRQTF 277
            .|.    ...|| |.|..:..:.:.|:   :|:|:.:|||.:|:::|.|       |        
Mouse   191 VWN----GPRDRFSHLQNFANVCVAAA---VSQTLSFPFDTVKRKMQAQSPYLPHYG-------- 240

  Fly   278 GQTLQCHGVWDCLRLTVRQEGVRGLYKGVAPTLLKSSMTTALYFSIYDKLKQV 330
            |..:...|..||.|..|:.:||.||:.|:...|||......:.||:::..|::
Mouse   241 GVDVHFSGAADCFRQIVKTQGVLGLWNGLTANLLKVVPYFGVMFSMFEFCKRI 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpc1NP_650034.1 Mito_carr 29..123 CDD:278578 19/91 (21%)
PTZ00169 33..329 CDD:240302 79/308 (26%)
Mito_carr 153..222 CDD:278578 24/70 (34%)
Mito_carr 233..328 CDD:278578 28/101 (28%)
Slc25a43NP_001078966.1 Mito_carr 8..101 CDD:278578 19/104 (18%)
Solcar 1 11..101 19/104 (18%)
Mito_carr 102..185 CDD:278578 26/82 (32%)
Solcar 2 105..185 26/79 (33%)
Mito_carr 197..295 CDD:278578 31/108 (29%)
Solcar 3 200..298 29/105 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0752
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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