DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tpc1 and C42C1.19

DIOPT Version :9

Sequence 1:NP_650034.1 Gene:Tpc1 / 41316 FlyBaseID:FBgn0037852 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001255630.1 Gene:C42C1.19 / 183402 WormBaseID:WBGene00302978 Length:403 Species:Caenorhabditis elegans


Alignment Length:152 Identity:28/152 - (18%)
Similarity:53/152 - (34%) Gaps:65/152 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 LLQITPLMGTNFM-AYRLFSDWACAFLEVSDRSQLPTWTLLGLGAS-SGML-------------- 250
            :..|..:.|..:: |.:|.:.|      ..|.|....:::||.|:: :||:              
 Worm   104 MAMIGSVQGAGWVPATKLIATW------FDDASYATMFSVLGCGSTFAGMIVPLFKTSYWRTIEF 162

  Fly   251 -SKTIVYPFDLIKKRLQIQGFESNRQTFGQTLQCHGVW----DCLRLTVR--------QEGVRGL 302
             |..::..|.:|.|:                      |    |.:|..|:        :|...|:
 Worm   163 NSGIVMLLFAIICKK----------------------WIITEDAIRKEVKPLKKEDMEEENTIGV 205

  Fly   303 YKGVAPTLLKSSM---TTALYF 321
            .|     ::|||:   ...:||
 Worm   206 KK-----IMKSSVMWHIALVYF 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpc1NP_650034.1 Mito_carr 29..123 CDD:278578
PTZ00169 33..329 CDD:240302 28/152 (18%)
Mito_carr 153..222 CDD:278578 4/20 (20%)
Mito_carr 233..328 CDD:278578 22/120 (18%)
C42C1.19NP_001255630.1 MFS_OPA_SLC37 7..389 CDD:340870 28/152 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H5982
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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