DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tpc1 and C47E12.2

DIOPT Version :9

Sequence 1:NP_650034.1 Gene:Tpc1 / 41316 FlyBaseID:FBgn0037852 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001379107.1 Gene:C47E12.2 / 177858 WormBaseID:WBGene00008147 Length:306 Species:Caenorhabditis elegans


Alignment Length:339 Identity:85/339 - (25%)
Similarity:156/339 - (46%) Gaps:56/339 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 STSEATTTTTPVPRRKHSTREQLH-QMLAGGLSAAITRSTCQPLDVLKIRFQLQVEPLGKNAAKE 70
            |||   .:.:|...:|.|..::.. .:|.||:||:::::...|::.:||..|:|.      :.|:
 Worm     2 STS---ASLSPAALQKRSDAQKFAIDLLIGGVSASVSKTVVAPIERVKILLQVQY------SHKD 57

  Fly    71 GPGALTSKYTSIGQAVKTIYREEGMLAFWKG-------HNPAQVLSIMYGICQFWTYEQLSL--M 126
            .|.  ..:|..|..|...:.:|:|.::||:|       :.|.|..:..:..    .|:.:.|  |
 Worm    58 IPA--DKRYNGIIDAFVRVPKEQGFVSFWRGNMTNVIRYFPTQAFNFAFND----LYKSILLKNM 116

  Fly   127 AKQTSYLADHQHLSNFLCGAAAGGAAVIISTPLDVIRTRL---IAQDTSKGYRNATRAVSAIVRQ 188
            .::.:.|:  ..:...:.|..||.:::.|..|||.|||||   |...|.:.|:.........|:.
 Worm   117 KRENNVLS--YSVRTLVSGGLAGCSSLCIVYPLDFIRTRLSADINHHTKREYKGLVDCTMKTVKN 179

  Fly   189 EGPRGMYRGLSSALLQITPLMGTNFMAYR-----LFSDWACAFLEVSDRSQLPTWTLLGLGASSG 248
            ||...:|||.:.:|        ..:..||     |:.  |......:|:.:||.:....:.....
 Worm   180 EGFSALYRGFAISL--------QTYFIYRSVYFGLYD--AIRNTINTDKKKLPFYASFAIAQGVT 234

  Fly   249 MLSKTIVYPFDLIKKRLQIQGFESNRQTFGQTLQCHGVWDCLRLTVRQEGVRGLYKGVAPTLLKS 313
            :||..:.||:|.:::|:.::|..|..:.|          ...|..|.:|||||||||....:.:|
 Worm   235 VLSSYLTYPWDTVRRRMMVKGQLSTSKAF----------SAARKIVHEEGVRGLYKGALANIFRS 289

  Fly   314 SMTTALYFSIYDKL 327
            : ..||..::|:::
 Worm   290 A-GGALVMALYEEI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpc1NP_650034.1 Mito_carr 29..123 CDD:278578 23/101 (23%)
PTZ00169 33..329 CDD:240302 79/312 (25%)
Mito_carr 153..222 CDD:278578 22/76 (29%)
Mito_carr 233..328 CDD:278578 26/95 (27%)
C47E12.2NP_001379107.1 PTZ00169 21..306 CDD:240302 79/317 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1857
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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