DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tpc1 and slc-25A42

DIOPT Version :10

Sequence 1:NP_650034.1 Gene:Tpc1 / 41316 FlyBaseID:FBgn0037852 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_492333.1 Gene:slc-25A42 / 172656 WormBaseID:WBGene00009666 Length:294 Species:Caenorhabditis elegans


Alignment Length:309 Identity:72/309 - (23%)
Similarity:136/309 - (44%) Gaps:52/309 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 AGGLSAAITRSTCQPLDVLKIRFQLQVEPLGKNAAKEGPGALTSKYTSIGQAVKTI---YREEGM 95
            ||.::.|:.::|..|||..||.||:.                :::..|...|:|.|   |||.|.
 Worm    20 AGAIAGALAKTTIAPLDRTKIYFQVS----------------STRGYSFRSAIKFIKLTYRENGF 68

  Fly    96 LAFWKGHNPAQVLSIMYGICQFWTYEQLSLMAKQTSYLADHQHLSNFLCGAAAGGAAVIISTPLD 160
            .|.::|::......:.|...||..:||...:.| .........:..::.|:.|...|.:|:.|||
 Worm    69 FALYRGNSATMARVVPYASMQFAAFEQYKKLLK-VDENGSRTPVKRYITGSLAATTATMITYPLD 132

  Fly   161 VIRTRLIAQDTSKGYRNATRAVSAIVRQEGPRGMYRGLSSALLQITPLMGTNFMAYR----LFSD 221
            ..:.|| :..:...|.:.........::.|.:.:|||:...:|.:.|..|::|..|.    ::.|
 Worm   133 TAKARL-SVSSKLQYSSLKHVFVKTYKEGGIQLLYRGIYPTILGVIPYAGSSFFTYETLKIMYRD 196

  Fly   222 WACAFLEVSDRSQLP-TWTLLGLGASSGMLSKTIVYPFDLIKKRLQIQGFESNRQTFGQTLQCHG 285
                     .|.::. ::..:..|..:|::.::..||.|::::|:|.....|.            
 Worm   197 ---------HRGEVENSYYRMLFGMLAGLIGQSSSYPLDIVRRRMQTGRIPSG------------ 240

  Fly   286 VWDCLRLTV---RQEGV-RGLYKGVAPTLLKSSMTTALYFSIYDKLKQV 330
             |..||..:   ..||: ||||||::...||..:...:.|:.|:|:.::
 Worm   241 -WSPLRALIHIYHTEGLKRGLYKGLSMNWLKGPIAVGVSFTTYEKVLEL 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpc1NP_650034.1 Mito_carr 29..123 CDD:395101 25/91 (27%)
Mito_carr 153..222 CDD:395101 16/72 (22%)
Mito_carr 233..328 CDD:395101 24/99 (24%)
slc-25A42NP_492333.1 PTZ00169 8..271 CDD:240302 68/290 (23%)

Return to query results.
Submit another query.