DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tpc1 and LOC1269574

DIOPT Version :10

Sequence 1:NP_650034.1 Gene:Tpc1 / 41316 FlyBaseID:FBgn0037852 Length:332 Species:Drosophila melanogaster
Sequence 2:XP_308217.4 Gene:LOC1269574 / 1269574 VectorBaseID:AGAMI1_007489 Length:333 Species:Anopheles gambiae


Alignment Length:327 Identity:91/327 - (27%)
Similarity:140/327 - (42%) Gaps:74/327 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 HQMLAGGLSAAITRS-TCQPLDVLKIRFQLQVEPLGKNAAKEGPGALTSKYTSIGQAVKTIYREE 93
            ::.|..|:|..:|.: ...|||::||||          |..:|..|...:|..:..|..||:|:|
Mosquito    37 YEHLVAGISGGVTSTLLLHPLDLIKIRF----------AVNDGRTASVPQYRGLTSAFMTIFRQE 91

  Fly    94 GMLAFWKGHNPAQVLSIMYGICQFWTYEQLSLMAKQTSYLAD---HQHLS---NFLCGAAAGGAA 152
            |....:||..|.     |:|....|.:..:.....:| ::.|   .|.|.   :.|..|.||...
Mosquito    92 GFRGLYKGVTPN-----MWGSGSAWGFYFMFYNTIKT-WIQDGNTAQPLGPTLHMLAAAEAGVLT 150

  Fly   153 VIISTPLDVIRTRLIAQ-----DTSKGYRNATRAVSAIVRQEGPRGMYR-------GLSSALLQI 205
            :.::.|:.|::|||..|     .:|.||......::.|.|.||.||:||       |:|...|| 
Mosquito   151 LAMTNPIWVVKTRLCLQCNERAGSSTGYAGMVDGLTKIYRTEGIRGLYRGFVPGMFGVSHGALQ- 214

  Fly   206 TPLMGTNFMAYRLFSDWACAFLEVSDR----------SQLPTWTLLGLGASSGMLSKTIVYPFDL 260
                   ||.|.          |:.::          ::|.|...|...|.|.:::....||:.:
Mosquito   215 -------FMTYE----------EMKNKYNQHRKRPIDAKLTTSEYLTFAAVSKLIAAAGTYPYQV 262

  Fly   261 IKKRLQIQGFESNRQTFGQTLQCHGVWDCLRLTVRQEGVRGLYKGVAPTLLKSSMTTALYFSIYD 325
            |:.|||.|.....           |.|||::||.|.|..||.|||:.|.|.:....|.:.|..|:
Mosquito   263 IRARLQDQNHSYK-----------GTWDCVKLTWRFESWRGFYKGLGPNLTRVIPATMVTFVTYE 316

  Fly   326 KL 327
            |:
Mosquito   317 KV 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpc1NP_650034.1 Mito_carr 29..123 CDD:395101 27/93 (29%)
Mito_carr 153..222 CDD:395101 24/80 (30%)
Mito_carr 233..328 CDD:395101 31/95 (33%)
LOC1269574XP_308217.4 Mito_carr 37..129 CDD:395101 29/107 (27%)
Mito_carr 132..229 CDD:395101 31/114 (27%)
Mito_carr 236..326 CDD:395101 31/94 (33%)

Return to query results.
Submit another query.