DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sodh-2 and AST2

DIOPT Version :9

Sequence 1:NP_524311.1 Gene:Sodh-2 / 41313 FlyBaseID:FBgn0022359 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_011027.1 Gene:AST2 / 856838 SGDID:S000000903 Length:430 Species:Saccharomyces cerevisiae


Alignment Length:83 Identity:22/83 - (26%)
Similarity:40/83 - (48%) Gaps:12/83 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 HGIEDLRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMI----IGHEAAGV 71
            ||......|.:....|:.:::::.::.||:...|:. :.:|      .|||:.    ||.|.:||
Yeast    59 HGPITFSYENKIKLPISKNKLVVQVNYVGLNPVDMK-IRNG------YTKPIYGEAGIGREYSGV 116

  Fly    72 VAKLGKKVTT-LKVGDRV 88
            :..:|..:|. ..|||.|
Yeast   117 ITHVGDNLTNRWNVGDDV 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sodh-2NP_524311.1 PLN02702 4..346 CDD:215378 22/83 (27%)
sorbitol_DH 8..349 CDD:176188 22/83 (27%)
AST2NP_011027.1 AST1_like 50..427 CDD:176209 22/83 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343137
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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