DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodh-2 and BDH1

DIOPT Version :9

Sequence 1:NP_524311.1 Gene:Sodh-2 / 41313 FlyBaseID:FBgn0022359 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_009341.2 Gene:BDH1 / 851239 SGDID:S000000056 Length:382 Species:Saccharomyces cerevisiae


Alignment Length:386 Identity:104/386 - (26%)
Similarity:182/386 - (47%) Gaps:63/386 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LHGIEDLRLEQRPIPEI-ADDEVLLAMDSVGICGSDVHYLAHG-----------RIGDFVLTKPM 62
            :|...|:     |.||| .||||::.:...||||||:|....|           ::.:..|  |:
Yeast    12 IHFTNDI-----PRPEIQTDDEVIIDVSWCGICGSDLHEYLDGPIFMPKDGECHKLSNAAL--PL 69

  Fly    63 IIGHEAAGVVAKLGKKVTTLKVGDRVAIEPGVPC--------------RYCDHCKQGRYNLCADM 113
            .:|||.:|:|:|:|.|||.:||||.|.::....|              :.||.|::|..|||...
Yeast    70 AMGHEMSGIVSKVGPKVTKVKVGDHVVVDAASSCADLHCWPHSKFYNSKPCDACQRGSENLCTHA 134

  Fly   114 VFCATPPYDGNLTRYYKHAADFCFKLPDHVSMEEGALLEPLSVGVHACRRAGVGLGSKVLILGAG 178
            .|.......|........:......:|..:.::..||:|||||..||.:.:|...||..|:||||
Yeast   135 GFVGLGVISGGFAEQVVVSQHHIIPVPKEIPLDVAALVEPLSVTWHAVKISGFKKGSSALVLGAG 199

  Fly   179 PIGLVTLLAAQAMGASEILITDLVQQRLDVAKELGATHTLLLQRDQSAEETVKVV------HQTM 237
            ||||.|:|..:.||||:|:::::.::|:::||:||..   :....:...::::::      |...
Yeast   200 PIGLCTILVLKGMGASKIVVSEIAERRIEMAKKLGVE---VFNPSKHGHKSIEILRGLTKSHDGF 261

  Fly   238 SEVPDKSIDCCGAESSARLAIFATRSGGVVVVVGMGAPE-VKLPLINALAREIDIRGVFRY-CND 300
                |.|.||.|.:.:...::.|....|....:.:..|: |....::...:|..:.|...| ..|
Yeast   262 ----DYSYDCSGIQVTFETSLKALTFKGTATNIAVWGPKPVPFQPMDVTLQEKVMTGSIGYVVED 322

  Fly   301 YSAALALVASGKV---NVKRLVTHHYDITETAEAFETSRRGTGGAIKVMIHVQPRDANNKV 358
            :...:..:.:|.:   :.|:|:|....|.:..|.         |..::|.|   :::|.|:
Yeast   323 FEEVVRAIHNGDIAMEDCKQLITGKQRIEDGWEK---------GFQELMDH---KESNVKI 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sodh-2NP_524311.1 PLN02702 4..346 CDD:215378 100/372 (27%)
sorbitol_DH 8..349 CDD:176188 101/375 (27%)
BDH1NP_009341.2 butanediol_DH_like 1..374 CDD:176195 104/386 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343128
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1063
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S593
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X751
TreeFam 1 0.960 - -
65.650

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