DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodh-2 and BDH2

DIOPT Version :9

Sequence 1:NP_524311.1 Gene:Sodh-2 / 41313 FlyBaseID:FBgn0022359 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_009340.1 Gene:BDH2 / 851238 SGDID:S000000057 Length:417 Species:Saccharomyces cerevisiae


Alignment Length:388 Identity:106/388 - (27%)
Similarity:176/388 - (45%) Gaps:74/388 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTK-----------PMIIGHEAAGVVAKLGKKV 79
            :|.||:::.::..||||:|:|....|.|  |....           |..:|||.||.|.::|..|
Yeast    24 VAPDELVIDIEWCGICGTDLHEYTDGPI--FFPEDGHTHEISHNPLPQAMGHEMAGTVLEVGPGV 86

  Fly    80 TTLKVGDRVAIEPGVPCR--------------YCDHCKQGRYNLCADMVFCATPPYDGNLTRYYK 130
            ..|||||:|.:||...||              :|..||:|.||:|:.:..|......|.......
Yeast    87 KNLKVGDKVVVEPTGTCRDRYRWPLSPNVDKEWCAACKKGYYNICSYLGLCGAGVQSGGFAERVV 151

  Fly   131 HAADFCFKLPDHVSMEEGALLEPLSVGVHACRRAGVGLGSKVLILGAGPIGLVTLLAAQAMGASE 195
            .....|:|:||.|.::..||::||:|..||.|......||..||:|||||||.|:||..|.|..:
Yeast   152 MNESHCYKVPDFVPLDVAALIQPLAVCWHAIRVCEFKAGSTALIIGAGPIGLGTILALNAAGCKD 216

  Fly   196 ILITDLVQQRLDVAKELGA------THTLLLQRDQSAEETVKVVHQTM--SEVPDKSIDCCGAES 252
            |::::..:.|.::|:::||      .|        :|:|::..:....  .:..|.:.||.|.|.
Yeast   217 IVVSEPAKVRRELAEKMGARVYDPTAH--------AAKESIDYLRSIADGGDGFDYTFDCSGLEV 273

  Fly   253 SARLAIFATRSGGVVVVVGM-GAPEVKLPLINALAREIDIRGVFRYC-NDYSAALALVASGKVNV 315
            :...||......|..|.:.| |..:::...::....|....|...|. :|:.|.:..:..|::::
Yeast   274 TLNAAIQCLTFRGTAVNLAMWGHHKIQFSPMDITLHERKYTGSMCYTHHDFEAVIEALEEGRIDI 338

  Fly   316 KR---LVTHHYDITETAEAFETSRRGTGGAIKVMIHVQP----------------RDANNKVK 359
            .|   ::|...:|.:          |..|||..:|:.:.                |:|:|:.|
Yeast   339 DRARHMITGRVNIED----------GLDGAIMKLINEKESTIKIILTPNNHGELNREADNEKK 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sodh-2NP_524311.1 PLN02702 4..346 CDD:215378 101/357 (28%)
sorbitol_DH 8..349 CDD:176188 102/360 (28%)
BDH2NP_009340.1 butanediol_DH_like 1..375 CDD:176195 102/370 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343129
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1063
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S593
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100349
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X751
TreeFam 1 0.960 - -
76.550

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