DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodh-2 and AT5G51970

DIOPT Version :9

Sequence 1:NP_524311.1 Gene:Sodh-2 / 41313 FlyBaseID:FBgn0022359 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_200010.1 Gene:AT5G51970 / 835272 AraportID:AT5G51970 Length:364 Species:Arabidopsis thaliana


Alignment Length:351 Identity:170/351 - (48%)
Similarity:235/351 - (66%) Gaps:8/351 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DNLTAVLHGIEDLRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMIIGHEA 68
            :|:.|.|.||..|:::...:|.:...:|.:.|.:|||||||||||...|..|||:.:||:||||.
plant    17 ENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHEC 81

  Fly    69 AGVVAKLGKKVTTLKVGDRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPPYDGNLTRYYKHAA 133
            ||::.::|::|..|.||||||:|||:.|..|:.|::||||||.:|.|.||||..|:|.....|.|
plant    82 AGIIEEVGEEVKHLVVGDRVALEPGISCWRCNLCREGRYNLCPEMKFFATPPVHGSLANQVVHPA 146

  Fly   134 DFCFKLPDHVSMEEGALLEPLSVGVHACRRAGVGLGSKVLILGAGPIGLVTLLAAQAMGASEILI 198
            |.|||||::||:||||:.|||||||||||||.||..:.||::|||||||||:|||:|.....|:|
plant   147 DLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVGPETNVLVMGAGPIGLVTMLAARAFSVPRIVI 211

  Fly   199 TDLVQQRLDVAKELGATHTLLLQRDQSAEET---VKVVHQTMSEVPDKSIDCCGAESSARLAIFA 260
            .|:.:.||.|||:|||..  ::|...:.|:.   |:.:.:.|....|.:.||.|...:...|:.|
plant   212 VDVDENRLAVAKQLGADE--IVQVTTNLEDVGSEVEQIQKAMGSNIDVTFDCAGFNKTMSTALAA 274

  Fly   261 TRSGGVVVVVGMGAPEVKLPLINALAREIDIRGVFRYCNDYSAALALVASGKVNVKRLVTHHYDI 325
            ||.||.|.:||||...:.:||..|.|||:|:.|||||.|.:...|..:.|||::||.|:||.:..
plant   275 TRCGGKVCLVGMGHGIMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLTSGKIDVKPLITHRFGF 339

  Fly   326 T--ETAEAFETSRRGTGGAIKVMIHV 349
            :  |..:|||||.||: .|||||.::
plant   340 SQKEVEDAFETSARGS-NAIKVMFNL 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sodh-2NP_524311.1 PLN02702 4..346 CDD:215378 168/346 (49%)
sorbitol_DH 8..349 CDD:176188 169/345 (49%)
AT5G51970NP_200010.1 PLN02702 1..364 CDD:215378 170/349 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 136 1.000 Domainoid score I1596
eggNOG 1 0.900 - - E1_COG1063
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56080
Inparanoid 1 1.050 327 1.000 Inparanoid score I688
OMA 1 1.010 - - QHG56613
OrthoDB 1 1.010 - - D1019156at2759
OrthoFinder 1 1.000 - - FOG0001480
OrthoInspector 1 1.000 - - otm2896
orthoMCL 1 0.900 - - OOG6_100349
Panther 1 1.100 - - LDO PTHR43161
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X751
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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