DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodh2 and CAD9

DIOPT Version :10

Sequence 1:NP_524311.1 Gene:Sodh2 / 41313 FlyBaseID:FBgn0022359 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_195643.1 Gene:CAD9 / 830088 AraportID:AT4G39330 Length:360 Species:Arabidopsis thaliana


Alignment Length:328 Identity:79/328 - (24%)
Similarity:141/328 - (42%) Gaps:61/328 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 DDEVLLAMDSVGICGSDVHYLAHGRIGDFVLT-KPMIIGHEAAGVVAKLGKKVTTLKVGDRVAIE 91
            :::|.:.:...|:|.:|:|.:.:    |:..: .|::.|||..|:..|:||.||..|.||||.: 
plant    37 ENDVTVKILFCGVCHTDLHTIKN----DWGYSYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGV- 96

  Fly    92 PGV---PCRYCDHCKQGRYNLCADMVFC-------ATPPYDGNLTRYYKHAA---DFCFKLPDHV 143
             ||   .|:.|:.|.|...|.|..|.|.       .|..|.|    |.::..   .|..:.|:::
plant    97 -GVISGSCQSCESCDQDLENYCPQMSFTYNAIGSDGTKNYGG----YSENIVVDQRFVLRFPENL 156

  Fly   144 SMEEGALLEPLSVGV--------HACRRAGVGLGSKVLILGAGPIGLVTLLAAQAMGASEILITD 200
            ..:.||.|  |..|:        :....||..||    :.|.|.:|.|.:...:|.|....:|:.
plant   157 PSDSGAPL--LCAGITVYSPMKYYGMTEAGKHLG----VAGLGGLGHVAVKIGKAFGLKVTVISS 215

  Fly   201 LVQQRLDVAKELGATHTLLLQRDQSAEETVKVVHQTMSEVPDKSIDCCGAESSARLAIFATRSGG 265
            ...:..:....|||...|:....|.    :|....||    |..||...|..:....:...:..|
plant   216 SSTKAEEAINHLGADSFLVTTDPQK----MKAAIGTM----DYIIDTISAVHALYPLLGLLKVNG 272

  Fly   266 VVVVVGMGAPEVKLPLIN-ALAREI----DIRG------VFRYC--NDYSAALALVASGKVN--V 315
            .::.:|:....::||:.. .|.|::    |:.|      :..:|  ::.:|.:.|:...::|  :
plant   273 KLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAM 337

  Fly   316 KRL 318
            :||
plant   338 ERL 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sodh2NP_524311.1 sorbitol_DH 8..349 CDD:176188 79/328 (24%)
CAD9NP_195643.1 PLN02586 1..360 CDD:166227 79/328 (24%)

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