DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodh-2 and sord

DIOPT Version :9

Sequence 1:NP_524311.1 Gene:Sodh-2 / 41313 FlyBaseID:FBgn0022359 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001165890.1 Gene:sord / 570613 ZFINID:ZDB-GENE-040426-1231 Length:354 Species:Danio rerio


Alignment Length:355 Identity:208/355 - (58%)
Similarity:262/355 - (73%) Gaps:2/355 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATDNLTAVLHGIEDLRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMIIG 65
            |..|||:.|||...|||||||||||...::|||.|.|||||||||||..:|||||||:.:|||:|
Zfish     1 MDKDNLSVVLHAKGDLRLEQRPIPEPGPNDVLLQMHSVGICGSDVHYWQNGRIGDFVVKQPMILG 65

  Fly    66 HEAAGVVAKLGKKVTTLKVGDRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPPYDGNLTRYYK 130
            |||:|.|.|:|..||.||.|||||:|||||....:..|.|.|||...:.||||||.||||.||||
Zfish    66 HEASGRVVKVGSAVTHLKPGDRVAVEPGVPREVDEFVKSGHYNLSPSIFFCATPPDDGNLCRYYK 130

  Fly   131 HAADFCFKLPDHVSMEEGALLEPLSVGVHACRRAGVGLGSKVLILGAGPIGLVTLLAAQAMGASE 195
            |:|.||:||||:|:.|||||:||||||:||||||||.|||.|.:.||||||||:||||:|||||:
Zfish   131 HSASFCYKLPDNVTYEEGALIEPLSVGIHACRRAGVTLGSSVFVCGAGPIGLVSLLAAKAMGASQ 195

  Fly   196 ILITDLVQQRLDVAKELGATHTLLLQRDQSAEETVKVVHQTMSEVPDKSIDCCGAESSARLAIFA 260
            ::|:||...||..|||:||...|.::::.|.::..|.|...:..:|...|:|.|.:||.:.||:|
Zfish   196 VIISDLSSDRLAKAKEIGADFLLPVKKEDSPQDLAKRVEGMLGCMPQICIECTGVQSSIQTAIYA 260

  Fly   261 TRSGGVVVVVGMGAPEVKLPLINALAREIDIRGVFRYCNDYSAALALVASGKVNVKRLVTHHYDI 325
            ||||||||.||:||....:||:||..||:||||||||||.:..|::::||.|||||.||||.:.:
Zfish   261 TRSGGVVVSVGLGAEMTTVPLLNAAVREVDIRGVFRYCNTWPVAISMLASKKVNVKPLVTHRFPL 325

  Fly   326 TETAEAFETSRRGTGGAIKVMIHVQPRDAN 355
            ....:||||:|:|.|  :|||:.....|.|
Zfish   326 EHAVQAFETTRQGLG--VKVMLKCDKNDQN 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sodh-2NP_524311.1 PLN02702 4..346 CDD:215378 203/341 (60%)
sorbitol_DH 8..349 CDD:176188 202/340 (59%)
sordNP_001165890.1 PLN02702 4..344 CDD:215378 203/341 (60%)
sorbitol_DH 7..347 CDD:176188 202/341 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578010
Domainoid 1 1.000 153 1.000 Domainoid score I4252
eggNOG 1 0.900 - - E1_COG1063
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56080
Inparanoid 1 1.050 423 1.000 Inparanoid score I1753
OMA 1 1.010 - - QHG56613
OrthoDB 1 1.010 - - D1019156at2759
OrthoFinder 1 1.000 - - FOG0001480
OrthoInspector 1 1.000 - - otm25520
orthoMCL 1 0.900 - - OOG6_100349
Panther 1 1.100 - - LDO PTHR43161
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X751
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.770

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