DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodh-2 and sord

DIOPT Version :9

Sequence 1:NP_524311.1 Gene:Sodh-2 / 41313 FlyBaseID:FBgn0022359 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001011264.1 Gene:sord / 496715 XenbaseID:XB-GENE-1005865 Length:360 Species:Xenopus tropicalis


Alignment Length:353 Identity:200/353 - (56%)
Similarity:263/353 - (74%) Gaps:5/353 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DNLTAVLHGIEDLRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMIIGHEA 68
            :||:.|:|||.|||||.||:||...:||||.|.|||||||||||..|||||||::.|||::||||
 Frog    11 ENLSVVVHGIGDLRLENRPVPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFIVKKPMVLGHEA 75

  Fly    69 AGVVAKLGKKVTTLKVGDRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPPYDGNLTRYYKHAA 133
            :|.|.|:|..|:.||.|||||||||||....:.||.|||||...:.||||||.||||.|||.|.|
 Frog    76 SGTVVKVGASVSHLKPGDRVAIEPGVPRETDEFCKMGRYNLSPTIFFCATPPDDGNLCRYYTHNA 140

  Fly   134 DFCFKLPDHVSMEEGALLEPLSVGVHACRRAGVGLGSKVLILGAGPIGLVTLLAAQAMGASEILI 198
            :||:||||:|:.|||||:||||||:||||||||.|||:|.|.||||||||:||.|:.||||:::|
 Frog   141 NFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGSRVFICGAGPIGLVSLLVAKMMGASQVVI 205

  Fly   199 TDLVQQRLDVAKELGATHTLLLQRDQSAEETV-KVVHQTMSEVPDKSIDCCGAESSARLAIFATR 262
            :||...||:.||||||  ..::|....|.|.: :.|.:.:..:|:.:|:|.||||..:..|:|||
 Frog   206 SDLSLPRLEKAKELGA--DFVVQVTTEAPEVIAQKVEKLLGIMPEITIECTGAESCIQAGIYATR 268

  Fly   263 SGGVVVVVGMGAPEVKLPLINALAREIDIRGVFRYCNDYSAALALVASGKVNVKRLVTHHYDITE 327
            |||.:::||:|...|.:|::||..||:||||:|||||.:..|:::::|.:|||..||||.:.:..
 Frog   269 SGGTLILVGLGPAMVNVPIVNAAVREVDIRGIFRYCNTWPMAISMLSSKRVNVAPLVTHRFPLEN 333

  Fly   328 TAEAFETSRRGTGGAIKVMIHVQPRDAN 355
            .||||||:::|.|  :|||:.....|.|
 Frog   334 AAEAFETTKKGMG--VKVMLKCDKNDQN 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sodh-2NP_524311.1 PLN02702 4..346 CDD:215378 196/342 (57%)
sorbitol_DH 8..349 CDD:176188 196/341 (57%)
sordNP_001011264.1 sorbitol_DH 14..353 CDD:176188 196/342 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 159 1.000 Domainoid score I4044
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H56080
Inparanoid 1 1.050 414 1.000 Inparanoid score I1798
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1019156at2759
OrthoFinder 1 1.000 - - FOG0001480
OrthoInspector 1 1.000 - - otm49134
Panther 1 1.100 - - LDO PTHR43161
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X751
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.160

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