DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodh-2 and Sord

DIOPT Version :9

Sequence 1:NP_524311.1 Gene:Sodh-2 / 41313 FlyBaseID:FBgn0022359 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_058748.2 Gene:Sord / 24788 RGDID:3734 Length:357 Species:Rattus norvegicus


Alignment Length:356 Identity:204/356 - (57%)
Similarity:260/356 - (73%) Gaps:11/356 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DNLTAVLHGIEDLRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMIIGHEA 68
            :||:.|:||..|:|||..||||:..::|||.|.|||||||||||..||||||||:.|||::||||
  Rat     8 ENLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVLGHEA 72

  Fly    69 AGVVAKLGKKVTTLKVGDRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPPYDGNLTRYYKHAA 133
            ||.|.|:|..|..||.|||||||||||....:.||.|||||...:.||||||.||||.|:|||:|
  Rat    73 AGTVTKVGPMVKHLKPGDRVAIEPGVPREIDEFCKIGRYNLTPSIFFCATPPDDGNLCRFYKHSA 137

  Fly   134 DFCFKLPDHVSMEEGALLEPLSVGVHACRRAGVGLGSKVLILGAGPIGLVTLLAAQAMGASEILI 198
            |||:||||.|:.|||||:||||||::||||..|.||:|||:.||||||:||||.|:|||||::::
  Rat   138 DFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPIGIVTLLVAKAMGASQVVV 202

  Fly   199 TDLVQQRLDVAKELGATHTLLLQRDQSAEET----VKVVHQTMSEVPDKSIDCCGAESSARLAIF 259
            .||...||..|||:||..|:     |.|:||    .|.|...:...|:.:|:|.|||||.:..|:
  Rat   203 IDLSASRLAKAKEVGADFTI-----QVAKETPHDIAKKVESVLGSKPEVTIECTGAESSVQTGIY 262

  Fly   260 ATRSGGVVVVVGMGAPEVKLPLINALAREIDIRGVFRYCNDYSAALALVASGKVNVKRLVTHHYD 324
            ||.|||.:||||||...:.|||::|..||:||:|||||||.:..|::::||..:|||.||||.:.
  Rat   263 ATHSGGTLVVVGMGPEMINLPLVHAAVREVDIKGVFRYCNTWPMAVSMLASKTLNVKPLVTHRFP 327

  Fly   325 ITETAEAFETSRRGTGGAIKVMIHVQPRDAN 355
            :.:..|||||:::|.|  :||||...|.|.|
  Rat   328 LEKAVEAFETAKKGLG--LKVMIKCDPNDQN 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sodh-2NP_524311.1 PLN02702 4..346 CDD:215378 198/345 (57%)
sorbitol_DH 8..349 CDD:176188 199/344 (58%)
SordNP_058748.2 sorbitol_DH 11..350 CDD:176188 199/345 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338521
Domainoid 1 1.000 161 1.000 Domainoid score I3924
eggNOG 1 0.900 - - E1_COG1063
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56080
Inparanoid 1 1.050 418 1.000 Inparanoid score I1747
OMA 1 1.010 - - QHG56613
OrthoDB 1 1.010 - - D1019156at2759
OrthoFinder 1 1.000 - - FOG0001480
OrthoInspector 1 1.000 - - otm46047
orthoMCL 1 0.900 - - OOG6_100349
Panther 1 1.100 - - LDO PTHR43161
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X751
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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