DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodh-2 and R04B5.5

DIOPT Version :9

Sequence 1:NP_524311.1 Gene:Sodh-2 / 41313 FlyBaseID:FBgn0022359 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_505591.1 Gene:R04B5.5 / 179405 WormBaseID:WBGene00011003 Length:347 Species:Caenorhabditis elegans


Alignment Length:347 Identity:179/347 - (51%)
Similarity:255/347 - (73%) Gaps:2/347 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATDNLTAVLHGIEDLRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMIIG 65
            |:.|||:|||:|::||||||.|||:...::||:.:.:||||||||||..||.||.||:.:|||:|
 Worm     1 MSQDNLSAVLYGVDDLRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIVG 65

  Fly    66 HEAAGVVAKLGKKVTTLKVGDRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPPYDGNLTRYYK 130
            ||.:|:|:::|.:|..||||||:|:|||:||:.|:|||.||||||.:|.|.||||..|.|:|:..
 Worm    66 HETSGIVSEVGNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFFATPPVHGTLSRFVV 130

  Fly   131 HAADFCFKLPDHVSMEEGALLEPLSVGVHACRRAGVGLGSKVLILGAGPIGLVTLLAAQAMGASE 195
            |.|||||||||::|.|:|||:|||||.:|||||..|.:|.:||:|||||||::.|:.|:|:||.:
 Worm   131 HDADFCFKLPDNLSFEDGALIEPLSVAIHACRRGNVQMGHRVLVLGAGPIGVLNLITAKAVGAGK 195

  Fly   196 ILITDLVQQRLDVAKELGATHTLLLQRDQSAEETVKVVHQTMSEVPDKSIDCCGAESSARLAIFA 260
            ::||||...||.:||:|||..|:.::.........:::.....:.||..|:|.||:.|...||..
 Worm   196 VVITDLDDGRLALAKKLGADATINVKGKSLDAVKSEIITALGDQQPDVCIECTGAQPSIETAITT 260

  Fly   261 TRSGGVVVVVGMGAPEVKLPLINALAREIDIRGVFRYCNDYSAALALVASGKVNVKRLVTHHYDI 325
            |:||||:|:||:||..|::|:|.:..||:|:||:|||.|.|..|:.|::|||:|:..|...||.:
 Worm   261 TKSGGVIVLVGLGADRVEIPIIESATREVDMRGIFRYVNCYPTAIELISSGKLNLSGLTRAHYKL 325

  Fly   326 TETAEAFETSRRGTGGAIKVMI 347
            .||.|||:.:::  ...|||.|
 Worm   326 EETQEAFKRTQK--ADVIKVFI 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sodh-2NP_524311.1 PLN02702 4..346 CDD:215378 176/341 (52%)
sorbitol_DH 8..349 CDD:176188 175/340 (51%)
R04B5.5NP_505591.1 sorbitol_DH 7..347 CDD:176188 175/341 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158388
Domainoid 1 1.000 157 1.000 Domainoid score I2533
eggNOG 1 0.900 - - E1_COG1063
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56080
Inparanoid 1 1.050 379 1.000 Inparanoid score I1197
Isobase 1 0.950 - 0 Normalized mean entropy S593
OMA 1 1.010 - - QHG56613
OrthoDB 1 1.010 - - D1019156at2759
OrthoFinder 1 1.000 - - FOG0001480
OrthoInspector 1 1.000 - - mtm4792
orthoMCL 1 0.900 - - OOG6_100349
Panther 1 1.100 - - LDO PTHR43161
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R311
SonicParanoid 1 1.000 - - X751
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

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