DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fdh and BDH1

DIOPT Version :9

Sequence 1:NP_524310.1 Gene:Fdh / 41311 FlyBaseID:FBgn0011768 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_009341.2 Gene:BDH1 / 851239 SGDID:S000000056 Length:382 Species:Saccharomyces cerevisiae


Alignment Length:384 Identity:103/384 - (26%)
Similarity:163/384 - (42%) Gaps:81/384 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 EVRIKITATGVCHTD----------------AFTLSGADPEGLFPVVLGHEGAGIVESVGEGVTN 85
            ||.|.::..|:|.:|                ...||.|    ..|:.:|||.:|||..||..||.
Yeast    28 EVIIDVSWCGICGSDLHEYLDGPIFMPKDGECHKLSNA----ALPLAMGHEMSGIVSKVGPKVTK 88

  Fly    86 FKAGDHVIALYIPQCNE--------------CKFCKSGKTNLCQKIRLTQGAGVMPEGTSRLSCK 136
            .|.||||:......|.:              |..|:.|..|||...... |.||:..|       
Yeast    89 VKVGDHVVVDAASSCADLHCWPHSKFYNSKPCDACQRGSENLCTHAGFV-GLGVISGG------- 145

  Fly   137 GQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEKVCLLGCGISTGYGAALNTAKVEAGSTCAVW 201
                        |||..||:...:..:.::.||:...|:.....|.:  |:..:..:.||:..|.
Yeast   146 ------------FAEQVVVSQHHIIPVPKEIPLDVAALVEPLSVTWH--AVKISGFKKGSSALVL 196

  Fly   202 GLGAVGLAVGLGCKKAGAGKIYGIDINPDKFELAKKFGFTDFVNPKDVADKGSIQNYLIDLTDG- 265
            |.|.:||...|..|..||.||...:|...:.|:|||.|...| ||.....| ||: .|..||.. 
Yeast   197 GAGPIGLCTILVLKGMGASKIVVSEIAERRIEMAKKLGVEVF-NPSKHGHK-SIE-ILRGLTKSH 258

  Fly   266 -GFDYTFECIGNVNTMRSALEA-THKGWGTSVVIGVAGAGQEISTRPFQLVV-GRVWKGSAFGGW 327
             ||||:::|.|...|..::|:| |.||..|::.:   ...:.:..:|..:.: .:|..||.  |:
Yeast   259 DGFDYSYDCSGIQVTFETSLKALTFKGTATNIAV---WGPKPVPFQPMDVTLQEKVMTGSI--GY 318

  Fly   328 RSVSDVPKLVEDYLKKDLLVD---EFITHELPLSQINEAF-----DLM-HKGESIRSII 377
             .|.|..::|......|:.::   :.||.:   .:|.:.:     :|| ||..:::.::
Yeast   319 -VVEDFEEVVRAIHNGDIAMEDCKQLITGK---QRIEDGWEKGFQELMDHKESNVKILL 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FdhNP_524310.1 FrmA 9..379 CDD:223990 103/384 (27%)
alcohol_DH_class_III 9..378 CDD:176260 103/384 (27%)
BDH1NP_009341.2 butanediol_DH_like 1..374 CDD:176195 103/384 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343148
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.