DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fdh and AT1G22430

DIOPT Version :9

Sequence 1:NP_524310.1 Gene:Fdh / 41311 FlyBaseID:FBgn0011768 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_001031079.1 Gene:AT1G22430 / 838849 AraportID:AT1G22430 Length:388 Species:Arabidopsis thaliana


Alignment Length:383 Identity:189/383 - (49%)
Similarity:246/383 - (64%) Gaps:12/383 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SATEGKVITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHTD-AFTLSGADPEGLFP 65
            |:.|||.||||||:..:|.:.||||||.|.||:|:||||||..|.:|||| .|......|...||
plant     7 SSNEGKPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFWKLSFGPISRFP 71

  Fly    66 VVLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQK-----IRLTQGAGV 125
            .:||||..|:|||:||.|..||.||.|:.::.|.|.|||.|||.|||.|.:     |..|:..|:
plant    72 RILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFISNTRRYGM 136

  Fly   126 MPEGTSRL-SCKGQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEKVCLLGCGISTGYGAALNT 189
                .||. ...|:.:.||:..|:|:|||||....|.||:.:.|::|..||.||:|||.|||...
plant   137 ----ASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVSTGIGAAWKV 197

  Fly   190 AKVEAGSTCAVWGLGAVGLAVGLGCKKAGAGKIYGIDINPDKFELAKKFGFTDFVNPKDVADKGS 254
            |.||.|||.|::|||||||||..|.:..||.||.|||.|.|||||.||||||||:||....:| .
plant   198 ANVEEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDKFELGKKFGFTDFINPTLCGEK-K 261

  Fly   255 IQNYLIDLTDGGFDYTFECIGNVNTMRSALEATHKGWGTSVVIGVAGAGQEISTRPFQLVVGRVW 319
            |...:.::|:||.||:|||:|..:.:..|..:|..|.|.:|::|:......||...|.|:.|||.
plant   262 ISEVIKEMTEGGVDYSFECVGLASLLNEAFISTRTGTGKTVMLGMEKHAAPISLGSFDLLRGRVI 326

  Fly   320 KGSAFGGWRSVSDVPKLVEDYLKKDLLVDEFITHELPLSQINEAFDLMHKGESIRSII 377
            .||.|||.:|..|:|.||:.||||:|.:|.||||||...:||:||.|:.:|:|:|.|:
plant   327 CGSLFGGLKSKLDIPILVDHYLKKELNLDSFITHELNFKEINKAFALLEEGKSLRCIL 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FdhNP_524310.1 FrmA 9..379 CDD:223990 185/376 (49%)
alcohol_DH_class_III 9..378 CDD:176260 185/376 (49%)
AT1G22430NP_001031079.1 alcohol_DH_plants 14..385 CDD:176261 185/376 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1062
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D664798at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43880
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

Return to query results.
Submit another query.