DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fdh and Adh6a

DIOPT Version :9

Sequence 1:NP_524310.1 Gene:Fdh / 41311 FlyBaseID:FBgn0011768 Length:379 Species:Drosophila melanogaster
Sequence 2:XP_006233433.3 Gene:Adh6a / 295498 RGDID:1310029 Length:375 Species:Rattus norvegicus


Alignment Length:378 Identity:170/378 - (44%)
Similarity:256/378 - (67%) Gaps:7/378 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TEGKVITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHTDAFTLSGADPEGL--FPV 66
            |.||.|||:||:||....||.||:::|.|||:.|||||:.::|:|.:|...|.|   |.|  ||:
  Rat     3 TLGKTITCRAAIAWAENSPLSIEEVQVEPPKSGEVRIKMISSGICGSDDHMLKG---ELLANFPL 64

  Fly    67 VLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQGAGVMPEGTS 131
            :.||||||||||||:||.:.|.||.|:.|.||||.||..|...|.|.|:|..:...:|||.:|||
  Rat    65 IPGHEGAGIVESVGDGVCSVKPGDKVLTLIIPQCRECDSCLHLKGNFCEKQDVLPCSGVMLDGTS 129

  Fly   132 RLSCKGQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEKVCLLGCGISTGYGAALNTAKVEAGS 196
            |.||:|::::|...||:|.|||||.:|::.||::.||::||||:.||..||||||:|:|||..||
  Rat   130 RFSCRGRKIYHSFRTSSFTEYTVVPEIAVVKIDDAAPMDKVCLISCGFPTGYGAAVNSAKVTPGS 194

  Fly   197 TCAVWGLGAVGLAVGLGCKKAGAGKIYGIDINPDKFELAKKFGFTDFVNPKDVADKGSIQNYLID 261
            ||.|:|||.||.|:.:|||.:||.:|.|:|||..||..|:..|.||.:|||.:  :..:|..:.:
  Rat   195 TCVVFGLGGVGSAIVMGCKASGASRIIGVDINEQKFPRARALGVTDCLNPKKL--EKPVQEVVKE 257

  Fly   262 LTDGGFDYTFECIGNVNTMRSALEATHKGWGTSVVIGVAGAGQEISTRPFQLVVGRVWKGSAFGG 326
            :|..|.|:.||.||.|:||.:|..:.:..:|..:::|:|.:...:|....:::.|:..||...|.
  Rat   258 MTGVGVDFAFEAIGQVDTMAAAWNSCNHSYGVCLIVGLAPSDTHLSLEASKILSGKTLKGVCLGD 322

  Fly   327 WRSVSDVPKLVEDYLKKDLLVDEFITHELPLSQINEAFDLMHKGESIRSIIKY 379
            :::...:|::|.|||:..:.:|..:||:||.||:::|.:|.|.|::||.::.:
  Rat   323 YKTRDCIPQIVTDYLQNKINIDPLVTHQLPFSQLHKALELYHSGKTIRCVLLF 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FdhNP_524310.1 FrmA 9..379 CDD:223990 167/371 (45%)
alcohol_DH_class_III 9..378 CDD:176260 167/370 (45%)
Adh6aXP_006233433.3 MDR 3..375 CDD:418376 170/376 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D324108at33208
OrthoFinder 1 1.000 - - FOG0000360
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43880
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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