DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fdh and SPBC1539.07c

DIOPT Version :9

Sequence 1:NP_524310.1 Gene:Fdh / 41311 FlyBaseID:FBgn0011768 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_596821.1 Gene:SPBC1539.07c / 2540073 PomBaseID:SPBC1539.07c Length:378 Species:Schizosaccharomyces pombe


Alignment Length:373 Identity:227/373 - (60%)
Similarity:280/373 - (75%) Gaps:3/373 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EGKVITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHTDAFTLSGADPEGLFPVVLG 69
            |||.|||||||||.||:||.||||:||||||||||:|:..:.||||||:||||.||||.||:|||
pombe     4 EGKTITCKAAVAWGAKEPLSIEDIQVAPPKAHEVRVKVDWSAVCHTDAYTLSGVDPEGAFPIVLG 68

  Fly    70 HEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQGAGVMPEGTSRLS 134
            |||||||||:||||.|.:.|||||.||.|:|.|||||:|||||||.|||.|||.|:||:||||.|
pombe    69 HEGAGIVESIGEGVINVRPGDHVILLYTPECKECKFCRSGKTNLCSKIRETQGRGLMPDGTSRFS 133

  Fly   135 CKGQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEKVCLLGCGISTGYGAALNTAKVEAGSTCA 199
            |:.:.|.|:||.|:|::|||||||||..|:..|||..:||||||::||:||..::||||:|||.|
pombe   134 CRDKTLLHYMGCSSFSQYTVVADISLVAISHSAPLRSICLLGCGVTTGFGAVTHSAKVESGSTVA 198

  Fly   200 VWGLGAVGLAVGLGCKKAGAGKIYGIDINPDKFELAKKFGFTDFVNPKDVADKGSIQNYLIDLTD 264
            |.|.|.||||...|...|||.:|..||||.||...|||||.|||::...|.|   :..|:||:||
pombe   199 VVGCGCVGLAAMQGAVAAGASRIIAIDINADKEVYAKKFGATDFIDSSKVKD---LVQYVIDVTD 260

  Fly   265 GGFDYTFECIGNVNTMRSALEATHKGWGTSVVIGVAGAGQEISTRPFQLVVGRVWKGSAFGGWRS 329
            ||.||.|:|.|||..|:..|:..|||||...|||||.||:.:..|||.:|.||...||||||.:.
pombe   261 GGVDYAFDCTGNVTVMQQELQFCHKGWGKLCVIGVAAAGKTLDFRPFLVVTGRQVLGSAFGGVKG 325

  Fly   330 VSDVPKLVEDYLKKDLLVDEFITHELPLSQINEAFDLMHKGESIRSII 377
            .|::|..|::|::....|||:||:|.||..||:|||.||:|:.||.::
pombe   326 RSELPNFVDEYMQGHFKVDEYITNEEPLKNINKAFDHMHEGKCIRCVV 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FdhNP_524310.1 FrmA 9..379 CDD:223990 224/369 (61%)
alcohol_DH_class_III 9..378 CDD:176260 224/369 (61%)
SPBC1539.07cNP_596821.1 FrmA 8..375 CDD:223990 224/369 (61%)
alcohol_DH_class_III 8..374 CDD:176260 224/369 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 59 1.000 Domainoid score I3044
eggNOG 1 0.900 - - E1_COG1062
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63142
OrthoFinder 1 1.000 - - FOG0000360
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100471
Panther 1 1.100 - - O PTHR43880
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1695
TreeFam 1 0.960 - -
109.780

Return to query results.
Submit another query.