DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fdh and SPCC13B11.04c

DIOPT Version :9

Sequence 1:NP_524310.1 Gene:Fdh / 41311 FlyBaseID:FBgn0011768 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_588247.1 Gene:SPCC13B11.04c / 2538802 PomBaseID:SPCC13B11.04c Length:380 Species:Schizosaccharomyces pombe


Alignment Length:376 Identity:241/376 - (64%)
Similarity:289/376 - (76%) Gaps:2/376 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SATEGKVITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHTDAFTLSGADPEGLFPV 66
            |.|.||:|.|||||||:...||.||:::|.||:.|||||||..:|||||||:||||.||||||||
pombe     4 SPTAGKIINCKAAVAWQPAAPLSIENVQVFPPRVHEVRIKIVNSGVCHTDAYTLSGKDPEGLFPV 68

  Fly    67 VLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQGAGVMPEGTS 131
            :|||||||||||||..||..:.||.|||||.|:|..||||||||||||.:||.|||.|:||:|||
pombe    69 ILGHEGAGIVESVGPQVTTVQVGDPVIALYTPECKTCKFCKSGKTNLCGRIRTTQGKGLMPDGTS 133

  Fly   132 RLSCKGQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEKVCLLGCGISTGYGAALNTAKVEAGS 196
            |.||.|..|.||||.|||:|||||||||:..|...|||:.||||||||:||||||..||.::.|.
pombe   134 RFSCNGNTLLHFMGCSTFSEYTVVADISVVAIERLAPLDSVCLLGCGITTGYGAATITADIKEGD 198

  Fly   197 TCAVWGLGAVGLAVGLGCKKAGAGKIYGIDINPDKFELAKKFGFTDFVNPKDVADKGSIQNYLID 261
            :.||:|||:|||||..|..|..||:|:|||:||:|...|..||.|||:||.|:  :..||:.||.
pombe   199 SVAVFGLGSVGLAVIQGAVKKRAGRIFGIDVNPEKKNWAMSFGATDFINPNDL--QSPIQDVLIH 261

  Fly   262 LTDGGFDYTFECIGNVNTMRSALEATHKGWGTSVVIGVAGAGQEISTRPFQLVVGRVWKGSAFGG 326
            .||||.|:||:|.|||:.|||||||.|||||.|:|||||.|||||||||||||.||||:|.||||
pombe   262 ETDGGLDWTFDCTGNVHVMRSALEACHKGWGQSIVIGVAAAGQEISTRPFQLVTGRVWRGCAFGG 326

  Fly   327 WRSVSDVPKLVEDYLKKDLLVDEFITHELPLSQINEAFDLMHKGESIRSII 377
            .:..|.:|.||::||...|.:|::|||..||.:|||||..||.|..|::::
pombe   327 VKGRSQLPDLVKEYLDHKLEIDKYITHRRPLKEINEAFTDMHNGNCIKTVL 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FdhNP_524310.1 FrmA 9..379 CDD:223990 237/369 (64%)
alcohol_DH_class_III 9..378 CDD:176260 237/369 (64%)
SPCC13B11.04cNP_588247.1 FrmA 11..379 CDD:223990 237/369 (64%)
alcohol_DH_class_III 11..377 CDD:176260 237/367 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 194 1.000 Domainoid score I703
eggNOG 1 0.900 - - E1_COG1062
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68076
Inparanoid 1 1.050 495 1.000 Inparanoid score I247
OMA 1 1.010 - - QHG63142
OrthoFinder 1 1.000 - - FOG0000360
OrthoInspector 1 1.000 - - oto101674
orthoMCL 1 0.900 - - OOG6_100471
Panther 1 1.100 - - LDO PTHR43880
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R428
SonicParanoid 1 1.000 - - X1695
TreeFam 1 0.960 - -
1413.860

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