DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fdh and Adh1

DIOPT Version :9

Sequence 1:NP_524310.1 Gene:Fdh / 41311 FlyBaseID:FBgn0011768 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_031435.1 Gene:Adh1 / 11522 MGIID:87921 Length:375 Species:Mus musculus


Alignment Length:377 Identity:211/377 - (55%)
Similarity:269/377 - (71%) Gaps:3/377 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ATEGKVITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHTDAFTLSGADPEGLFPVV 67
            :|.||||.|||||.||..||..|||||||||||||||||:.|||||.:|...:||.....| |.|
Mouse     2 STAGKVIKCKAAVLWELHKPFTIEDIEVAPPKAHEVRIKMVATGVCRSDDHVVSGTLVTPL-PAV 65

  Fly    68 LGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQGAGVMPEGTSR 132
            |||||||||||||||||..|.||.||.|:.|||.||:.||..::|.|.:..|....|.:.|||||
Mouse    66 LGHEGAGIVESVGEGVTCVKPGDKVIPLFSPQCGECRICKHPESNFCSRSDLLMPRGTLREGTSR 130

  Fly   133 LSCKGQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEKVCLLGCGISTGYGAALNTAKVEAGST 197
            .||||:|:.:|:.||||::||||.||::.||:..:||:||||:|||.|||||:|:..|||..|||
Mouse   131 FSCKGKQIHNFISTSTFSQYTVVDDIAVAKIDGASPLDKVCLIGCGFSTGYGSAVKVAKVTPGST 195

  Fly   198 CAVWGLGAVGLAVGLGCKKAGAGKIYGIDINPDKFELAKKFGFTDFVNPKDVADKGSIQNYLIDL 262
            |||:|||.|||:|.:|||.|||.:|..:|||.|||..||:.|.|:.:||:|.:.  .||..|.::
Mouse   196 CAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYSK--PIQEVLQEM 258

  Fly   263 TDGGFDYTFECIGNVNTMRSALEATHKGWGTSVVIGVAGAGQEISTRPFQLVVGRVWKGSAFGGW 327
            ||||.|::||.||.::||.|||.:.|...|.|||:||....|.:|..|..|::||.|||:.|||:
Mouse   259 TDGGVDFSFEVIGRLDTMTSALLSCHAACGVSVVVGVPPNAQNLSMNPMLLLLGRTWKGAIFGGF 323

  Fly   328 RSVSDVPKLVEDYLKKDLLVDEFITHELPLSQINEAFDLMHKGESIRSIIKY 379
            :|...|||||.|::.|...:|..|||.||..:|||||||:..|:|||:::.:
Mouse   324 KSKDSVPKLVADFMAKKFPLDPLITHVLPFEKINEAFDLLRSGKSIRTVLTF 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FdhNP_524310.1 FrmA 9..379 CDD:223990 207/369 (56%)
alcohol_DH_class_III 9..378 CDD:176260 207/368 (56%)
Adh1NP_031435.1 alcohol_DH_class_I_II_IV 3..375 CDD:176259 211/374 (56%)
FrmA 8..375 CDD:223990 207/369 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 79 1.000 Domainoid score I8648
eggNOG 1 0.900 - - E1_COG1062
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D324108at33208
OrthoFinder 1 1.000 - - FOG0000360
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100471
Panther 1 1.100 - - O PTHR43880
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.780

Return to query results.
Submit another query.