DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and tspan5

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001072198.1 Gene:tspan5 / 779644 XenbaseID:XB-GENE-868310 Length:268 Species:Xenopus tropicalis


Alignment Length:285 Identity:112/285 - (39%)
Similarity:169/285 - (59%) Gaps:22/285 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GGNYMHPRISTYPHHFSYVSSCVKYMIFLLNFLFWLFGGLLLAIGVYAFMDKLMDGNGWLRLDTI 73
            |.:|..|.          ||.|:||.||..|.:|||.|...|.:|::|:.:|.:..|    :.:|
 Frog     3 GKHYKGPE----------VSCCIKYFIFGFNVIFWLLGITFLGVGLWAWSEKGVLSN----ISSI 53

  Fly    74 YDV-IFNISLVMIIAGVIVFTVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQY 137
            .|: .|:...:.::.|.::|.:.||||:|||||||:|||.:|:.|.:.|.||::..::.|||..:
 Frog    54 TDLGGFDPVWLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDW 118

  Fly   138 MNSFLEYQFTDKIIHSYRDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNC--SSPSVERC 200
            :...|:: |.:..|.:||||.||||.|||.|:.:.|||.  .|..||:.|.||||  ::.|.|||
 Frog   119 IKDQLQF-FINNNIRAYRDDIDLQNLIDFTQEYWQCCGA--FGADDWNLNIYFNCTDANASRERC 180

  Fly   201 GVPYSCCINATDISSGLVNIMCGYGVQVRSVAAASKRIWTSGCIEIVRVWVERNLYVIAGVALGI 265
            |||:|||  ..|.:..::|..|||.|:.:......:.|.|.||:.....|::.||.::|||.:||
 Frog   181 GVPFSCC--TKDPAEDVINTQCGYDVRQKPELDQQETIHTKGCVPQFEKWLQDNLTIVAGVFIGI 243

  Fly   266 ALLQLFVIYLAKTLEGQIDLQKSRW 290
            ||||:|.|.||:.|...|:..::.|
 Frog   244 ALLQIFGICLAQNLVSDIEAVRASW 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 94/234 (40%)
penumbra_like_LEL 132..255 CDD:239411 50/124 (40%)
tspan5NP_001072198.1 TM4SF9_like_LEL 113..233 CDD:239412 50/124 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48585
OrthoDB 1 1.010 - - D574036at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X349
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.030

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