DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and tspan15

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001039054.1 Gene:tspan15 / 733836 XenbaseID:XB-GENE-5960404 Length:297 Species:Xenopus tropicalis


Alignment Length:295 Identity:104/295 - (35%)
Similarity:157/295 - (53%) Gaps:35/295 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YPHHFSYVSSCVKYMIFLLNFLFWLFGGLLLAIGVYAFMDKLMDGNGWLRLDTIYDVIFNISLVM 84
            |...|:|:  |:|:.:.:.:.:|||.|..:||||:||.:::       .:..|::.:....|:::
 Frog     8 YCSRFNYL--CLKFALVVYSTVFWLIGAFVLAIGIYAEVER-------QKYKTLHGIFLAPSIIL 63

  Fly    85 IIAGVIVFTVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDK 149
            |:.||::|.|||.|.|.:||:|..|||::...|::..|||:...||..:|.......|.:.. .|
 Frog    64 ILLGVLMFVVSFIGVLASLRDNVCLLKVFMYTLVVCLILELVGGIIALIFRHQTMDLLNHNI-GK 127

  Fly   150 IIHSYRDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNCSSPSVERCGVPYSCCI-NATDI 213
            .|.:|.||.|.:|.:||.|::|.|||  ...|.||.||||..||:|....|||||:||| |.||:
 Frog   128 GIRNYYDDLDFKNIMDFTQKQFRCCG--GKDYLDWKKNEYHECSAPGPLACGVPYTCCIRNKTDV 190

  Fly   214 SSGLVNIMCGYGVQVRSVAAASKRIWTSGCIEIVRVWVERNLYVIAGVALGIALLQ-----LFVI 273
                :|.||||.........|.|.|:..||.:.|.:|...|..::|||.|||.|.|     |.::
 Frog   191 ----MNTMCGYKAMNYERLDAMKFIYVRGCTDAVIIWFLDNYTIMAGVLLGILLPQFLGILLCLL 251

  Fly   274 YLAK-------------TLEGQIDLQKSRWSXVQC 295
            |:.:             .|||:....:..:|.|.|
 Frog   252 YITRIEDIISEWNSSGVLLEGESVKPEIEFSKVGC 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 91/250 (36%)
penumbra_like_LEL 132..255 CDD:239411 49/123 (40%)
tspan15NP_001039054.1 penumbra_like_LEL 111..228 CDD:239411 49/123 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1416189at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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