DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and Tspan15

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_932113.2 Gene:Tspan15 / 70423 MGIID:1917673 Length:294 Species:Mus musculus


Alignment Length:267 Identity:94/267 - (35%)
Similarity:146/267 - (54%) Gaps:28/267 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YPHHFSYVSSCVKYMIFLLNFLFWLFGGLLLAIGVYAFMDKLMDGNGWLRLDTIYDVIFNISLVM 84
            |...|||:  .:|:.:.:.:.:|||.|||:|::|:||..::       .:..|:.......::::
Mouse    11 YCARFSYL--WLKFSLIIYSTVFWLIGGLVLSVGIYAEAER-------QKYKTLESAFLAPAIIL 66

  Fly    85 IIAGVIVFTVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDK 149
            |:.||::|.|||.|.|.:||:|..||:.:...|.:..::|:...|:..:|......||    .|.
Mouse    67 ILLGVVMFIVSFIGVLASLRDNLCLLQSFMYILGICLVMELIGGIVALIFRNQTIDFL----NDN 127

  Fly   150 I---IHSYRDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNCSSPSVERCGVPYSCCI-NA 210
            |   |.:|.||.|.:|.:||.|::|.|||  ...|:|||||:|.:||:|....|||||:||| |.
Mouse   128 IRRGIENYYDDLDFKNIMDFVQKKFKCCG--GEDYRDWSKNQYHDCSAPGPLACGVPYTCCIRNT 190

  Fly   211 TDISSGLVNIMCGYGVQVRSVAAASKRIWTSGCIEIVRVWVERNLYVIAGVALGIALLQ-----L 270
            ||:    ||.||||....:....|...|...||...|.:|...|..::||:.|||.|.|     |
Mouse   191 TDV----VNTMCGYKTIDKERLNAQNIIHVRGCTNAVLIWFMDNYTIMAGLLLGILLPQFLGVLL 251

  Fly   271 FVIYLAK 277
            .::|:.:
Mouse   252 TLLYITR 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 82/236 (35%)
penumbra_like_LEL 132..255 CDD:239411 51/126 (40%)
Tspan15NP_932113.2 Tetraspannin 19..256 CDD:278750 89/253 (35%)
penumbra_like_LEL 114..231 CDD:239411 51/126 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1416189at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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