DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and ROM1

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_000318.2 Gene:ROM1 / 6094 HGNCID:10254 Length:351 Species:Homo sapiens


Alignment Length:340 Identity:78/340 - (22%)
Similarity:126/340 - (37%) Gaps:80/340 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IFLLNFLFWLFGGLLLAIGVYAFMDKLMDGNGWLRLDTIYDVIFNISLVMIIAGVIVFTVSFAGC 99
            ::||::|..|.||::|....:..: :|.....:|.....:.|:...:|.   ||.:.......| 
Human    21 LWLLSWLLALAGGVILLCSGHLLV-QLRHLGTFLAPSCQFPVLPQAALA---AGAVALGTGLVG- 80

  Fly   100 LGALREN-------TWLLKLYSMCL--------LLFFILEMSLAIICFVFPQYMNSFLEYQFTDK 149
            :||.|.:       .|...|..:.:        ||...|.::||:     |..::..||......
Human    81 VGASRASLNAALYPPWRGVLGPLLVAGTAGGGGLLVVGLGLALAL-----PGSLDEALEEGLVTA 140

  Fly   150 IIHSYRDDS-----DLQNFIDFAQQEFNCCGLSNAGYQD-----WSKNEYFNCSSPSV-ERC--- 200
            :.| |:|..     ..:..:|..|..::|||  ..||:|     |..:.|.:.....| :|.   
Human   141 LAH-YKDTEVPGHCQAKRLVDELQLRYHCCG--RHGYKDWFGVQWVSSRYLDPGDRDVADRIQSN 202

  Fly   201 --------GVPYSCCINATDISSGLVN-IMCGYGVQVRSVAAASKRIWTSGCIEIVRVWVERNLY 256
                    |||:||| |.......|.| :...|...:......::.:|..||.|::...:: :|.
Human   203 VEGLYLTDGVPFSCC-NPHSPRPCLQNRLSDSYAHPLFDPRQPNQNLWAQGCHEVLLEHLQ-DLA 265

  Fly   257 VIAGVALGIA-LLQLFVI----YLAKTLE-------------------GQIDLQKSRW--SXVQC 295
            ...|..|.:. |||..|:    ||...||                   |..|:.|:.|  . |.|
Human   266 GTLGSMLAVTFLLQALVLLGLRYLQTALEGLGGVIDAGGETQGYLFPSGLKDMLKTAWLQGGVAC 330

  Fly   296 HHPYLYGYPPCEDDP 310
             .|.....||.|..|
Human   331 -RPAPEEAPPGEAPP 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 61/293 (21%)
penumbra_like_LEL 132..255 CDD:239411 32/145 (22%)
ROM1NP_000318.2 peripherin_like_LEL 126..265 CDD:239415 32/143 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..351 5/14 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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