DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and Tspan5

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:XP_006501799.1 Gene:Tspan5 / 56224 MGIID:1928096 Length:311 Species:Mus musculus


Alignment Length:258 Identity:101/258 - (39%)
Similarity:153/258 - (59%) Gaps:12/258 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 FLLNFLFWLFGGLLLAIGVYAFMDKLMDGNGWLRLDTIYDV-IFNISLVMIIAGVIVFTVSFAGC 99
            ||:.......|...|.||::|:.:|.:..|    :.:|.|: .|:...:.::.|.::|.:.||||
Mouse    63 FLVRIHSHFLGITFLGIGLWAWNEKGVLSN----ISSITDLGGFDPVWLFLVVGGVMFILGFAGC 123

  Fly   100 LGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDKIIHSYRDDSDLQNFI 164
            :|||||||:|||.:|:.|.:.|.||::..::.|||..::...| |.|.:..|.:||||.||||.|
Mouse   124 IGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQL-YFFINNNIRAYRDDIDLQNLI 187

  Fly   165 DFAQQEFNCCGLSNAGYQDWSKNEYFNC--SSPSVERCGVPYSCCINATDISSGLVNIMCGYGVQ 227
            ||.|:.:.|||.  .|..||:.|.||||  |:.|.||||||:|||  ..|.:..::|..|||..:
Mouse   188 DFTQEYWQCCGA--FGADDWNLNIYFNCTDSNASRERCGVPFSCC--TKDPAEDVINTQCGYDAR 248

  Fly   228 VRSVAAASKRIWTSGCIEIVRVWVERNLYVIAGVALGIALLQLFVIYLAKTLEGQIDLQKSRW 290
            .:........|:|.||:.....|::.||.::||:.:||||||:|.|.||:.|...|:..::.|
Mouse   249 QKPEVDQQIVIYTKGCVPQFEKWLQDNLTIVAGIFIGIALLQIFGICLAQNLVSDIEAVRASW 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 95/234 (41%)
penumbra_like_LEL 132..255 CDD:239411 51/124 (41%)
Tspan5XP_006501799.1 TM4SF9_like_LEL 156..276 CDD:239412 51/124 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48585
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X349
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.880

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