DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and prph2b

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_571642.1 Gene:prph2b / 559209 ZFINID:ZDB-GENE-000616-9 Length:342 Species:Danio rerio


Alignment Length:294 Identity:67/294 - (22%)
Similarity:120/294 - (40%) Gaps:62/294 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IFLLNFLFWLFGGLLLAIGVYAFMD-----KLMDGNGWLRLDTIYDVIFNISLVMIIAGVIVFTV 94
            ::||.:|..:.|.|:.:.|::..::     ::||.|         :..|..:|::::..|.....
Zfish    20 LWLLYWLSVMAGILIFSTGIFLKIELRKRSEMMDNN---------ESHFVPNLLILVGLVACGVN 75

  Fly    95 SFAG--C---LGALRENTW--LLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDKIIH 152
            :|.|  |   |..::...|  :||.|....::|.|:....|::||:    |...|.:...:.:.:
Zfish    76 TFGGKVCHDSLDTVKFTKWKTMLKAYMSGCVIFCIVLFVTALLCFL----MQISLHFALAEGLKN 136

  Fly   153 --SYRDDSD------LQNFIDFAQQEFNCCGLSNAGYQDWSK-----NEYFNCSSPSVE------ 198
              .|..|:|      ::..:|..|.||.|||  |..|:||.:     |.|.:.|:..::      
Zfish   137 GMKYYKDTDTPGRCFMKRTLDMTQIEFRCCG--NNNYKDWFEIQWISNRYLDFSNDEIKDRVQSN 199

  Fly   199 ------RCGVPYSCCINATD---ISSGLVNIMCGYGVQVRSVAAASKRIWTSGCIEIVRVWVERN 254
                  ...||:|||...:.   |...|.|....|.....:   ....:||.||.|.:..:....
Zfish   200 VEGKFLMDSVPFSCCNPGSPRPCIQHHLTNNSAHYSYDHHT---EDLNVWTRGCREALVSYYGGM 261

  Fly   255 LYVIAGVALGIALLQLFVI----YLAKTLEGQID 284
            :..|....|...::|..|.    ||:.:||...|
Zfish   262 MNSIGAFVLLFIIMQAVVTVGLQYLSTSLETLTD 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 61/275 (22%)
penumbra_like_LEL 132..255 CDD:239411 34/150 (23%)
prph2bNP_571642.1 Tetraspannin 20..279 CDD:278750 61/276 (22%)
peripherin_like_LEL 120..262 CDD:239415 34/150 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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