DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and Tspan33

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001102697.1 Gene:Tspan33 / 500065 RGDID:1560915 Length:283 Species:Rattus norvegicus


Alignment Length:298 Identity:119/298 - (39%)
Similarity:178/298 - (59%) Gaps:26/298 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 STYPHHFSYVSSCVKYMIFLLNFLFWLFGGLLLAIGVYAFMDKLMDGN-GWLRLDTIYDVIFNIS 81
            :.|...||:||..|||::|..|.|||:...:::|:||||.:.|..:.. ..|.:|.        :
  Rat     9 AAYGEEFSFVSPLVKYLLFFFNMLFWVISMVMVAVGVYARLMKHAEAALACLAVDP--------A 65

  Fly    82 LVMIIAGVIVFTVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQF 146
            :::|:.||::|.::|.||:|:||||..||:.:|:||.:.|:|:::..|:.|||.......:....
  Rat    66 ILLIVVGVLMFLLTFCGCIGSLRENICLLQTFSLCLTIVFLLQLAAGILGFVFSDKARGKVSEII 130

  Fly   147 TDKIIHSYRDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNCS--SPSVERCGVPYSCCIN 209
            .:.|:| ||||.||||.|||.|::|:|||  ...|:|||:|.|||||  :||.|||.||||||:.
  Rat   131 NNAIVH-YRDDLDLQNLIDFGQKKFSCCG--GISYRDWSQNMYFNCSEDNPSRERCSVPYSCCLP 192

  Fly   210 ATDISSGLVNIMCGYGVQVRSVAAASKRIWTSGCIEIVRVWVERNLYVIAGVALGIALLQLFVIY 274
            ..  :..::|.|||.|:|......|||.|:|:|||:.:..|:..||:::.|||||:|:.||..|.
  Rat   193 TP--NQAVINTMCGQGMQALDYLEASKVIYTNGCIDKLVNWIHSNLFLLGGVALGLAIPQLVGIL 255

  Fly   275 LAKTLEGQIDLQKSRWSXVQCHHPYLYGYPPCEDDPYY 312
            |::.|..||..|.......|.|..          ||:|
  Rat   256 LSQVLVNQIKDQIKLQLYNQQHRA----------DPWY 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 98/234 (42%)
penumbra_like_LEL 132..255 CDD:239411 57/124 (46%)
Tspan33NP_001102697.1 penumbra_like_LEL 116..236 CDD:239411 57/124 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 208 1.000 Domainoid score I2760
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8213
Inparanoid 1 1.050 222 1.000 Inparanoid score I3449
OMA 1 1.010 - - QHG48585
OrthoDB 1 1.010 - - D1416189at2759
OrthoFinder 1 1.000 - - FOG0003557
OrthoInspector 1 1.000 - - otm44842
orthoMCL 1 0.900 - - OOG6_108299
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X349
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.780

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