DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp86D and Tsp97E

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001263002.1 Gene:Tsp97E / 43241 FlyBaseID:FBgn0039465 Length:228 Species:Drosophila melanogaster


Alignment Length:283 Identity:58/283 - (20%)
Similarity:108/283 - (38%) Gaps:70/283 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SCVKYMIFLLNFLFWLFGGLLLAIGVYAFMDKLMDGNGWLRLDTIYDVIFNISLV--MIIAGVIV 91
            :|.|..:..||.|:.:.|.||:.:||||               ....::.|:.:|  ::..|||:
  Fly     6 TCSKNALIALNILYVMIGFLLIGVGVYA---------------RAASIVTNLPIVGGILACGVIL 55

  Fly    92 FTVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDKIIHSYRD 156
            ..:|..|..||::.:..:|..|.:.|.:.|:::.|:|..|..    :||..:.||.::...:...
  Fly    56 ICISMLGLAGAVKHHQVMLFFYMIILFMLFLIQFSIASSCLA----VNSEQQQQFAEQGWMTVPT 116

  Fly   157 DSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNCSSPSVERCGVPYSCCINATDISSGLVNIM 221
            |...|     .|....|||              ||.::||......|      :.:.|..|:|..
  Fly   117 DLRKQ-----VQDSLKCCG--------------FNATAPSTTSVVPP------SNEPSCELINQQ 156

  Fly   222 CGYGVQVRSVAAASKRIWTSGCIEIVRVWVERNLYVIAGVALGIALLQLFVIYLAKTLEGQIDLQ 286
            |       ...::........|..::...::....:..|:.:..:..::..::||:....|.|  
  Fly   157 C-------CAHSSEPDCRCEPCGPLLEDKIDYAFKLCGGLGIFFSFTEVLAVFLARRYRNQHD-- 212

  Fly   287 KSRWSXVQCH--------HPYLY 301
                   .|:        |.|||
  Fly   213 -------PCYLPARAVFPHDYLY 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 43/233 (18%)
penumbra_like_LEL 132..255 CDD:239411 20/122 (16%)
Tsp97ENP_001263002.1 Tetraspannin 7..204 CDD:278750 49/247 (20%)
tetraspanin_LEL <121..177 CDD:243179 15/87 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442869
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.