DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and Tsp47F

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster


Alignment Length:269 Identity:71/269 - (26%)
Similarity:129/269 - (47%) Gaps:44/269 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SCVKYMIFLLNFLFWLFG-GLLLAIGVYAFMDKLMDGNGWLRLDTIYDVIFNISLVMIIAGVIVF 92
            |.:||::|..|.||.:.| |:|:|..|.     |.|.|.:...  :...:....:|:|:.|:|:|
  Fly     7 SLIKYVLFAFNVLFAISGLGILIAGAVV-----LADVNEFNHF--VEGRVLAPPIVLIVTGLIIF 64

  Fly    93 TVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDKIIHSYRDD 157
            .::..||.||::|:..||..:::.|.:.||:|:::.|...||.:.:...::....:.|..|..:|
  Fly    65 LIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSED 129

  Fly   158 SDLQNFIDFAQQEFNCCGLSNAGYQDW---SKNEYFNCSSPSVERCGVPYSCC----INATDISS 215
            :...   |..||:..|||:.:..  ||   |.|:            .:|.|||    |::|    
  Fly   130 TMAW---DNIQQKLMCCGVDSPA--DWRTLSANK------------TLPGSCCQPQYIDST---- 173

  Fly   216 GLVNIMCGYGVQVRSVAAASKRIWTSGCIEIVRVWVERNLYVIAGVALGIALLQLFVIYLAKTLE 280
                    .|..:.|.|....:.:..||:..::..:|:|..::.||.:|||.:|:..|.||..|.
  Fly   174 --------VGHCLESPALGKDKYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLA 230

  Fly   281 GQIDLQKSR 289
            ..|..::::
  Fly   231 NSIRQERAK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 60/238 (25%)
penumbra_like_LEL 132..255 CDD:239411 27/129 (21%)
Tsp47FNP_725044.1 Tetraspannin 9..233 CDD:278750 69/259 (27%)
uroplakin_I_like_LEL 102..205 CDD:239409 27/131 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442892
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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