DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and Tspan5

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001004090.2 Gene:Tspan5 / 362048 RGDID:1303176 Length:268 Species:Rattus norvegicus


Alignment Length:285 Identity:112/285 - (39%)
Similarity:166/285 - (58%) Gaps:22/285 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GGNYMHPRISTYPHHFSYVSSCVKYMIFLLNFLFWLFGGLLLAIGVYAFMDKLMDGNGWLRLDTI 73
            |.:|..|.          ||.|:||.||..|.:||..|...|.||::|:.:|.:..|    :.:|
  Rat     3 GKHYKGPE----------VSCCIKYFIFGFNVIFWFLGITFLGIGLWAWNEKGVLSN----ISSI 53

  Fly    74 YDV-IFNISLVMIIAGVIVFTVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQY 137
            .|: .|:...:.::.|.::|.:.||||:|||||||:|||.:|:.|.:.|.||::..::.|||..:
  Rat    54 TDLGGFDPVWLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDW 118

  Fly   138 MNSFLEYQFTDKIIHSYRDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNC--SSPSVERC 200
            :...| |.|.:..|.:||||.||||.|||.|:.:.|||.  .|..||:.|.||||  |:.|.|||
  Rat   119 IKDQL-YFFINNNIRAYRDDIDLQNLIDFTQEYWQCCGA--FGADDWNLNIYFNCTDSNASRERC 180

  Fly   201 GVPYSCCINATDISSGLVNIMCGYGVQVRSVAAASKRIWTSGCIEIVRVWVERNLYVIAGVALGI 265
            |||:|||  ..|.:..::|..|||..:.:........|:|.||:.....|::.||.::||:.:||
  Rat   181 GVPFSCC--TKDPAEDVINTQCGYDARQKPEVDQQIVIYTKGCVPQFEKWLQDNLTIVAGIFIGI 243

  Fly   266 ALLQLFVIYLAKTLEGQIDLQKSRW 290
            ||||:|.|.||:.|...|:..::.|
  Rat   244 ALLQIFGICLAQNLVSDIEAVRASW 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 95/234 (41%)
penumbra_like_LEL 132..255 CDD:239411 51/124 (41%)
Tspan5NP_001004090.2 Tetraspannin 15..257 CDD:395265 103/250 (41%)
TM4SF9_like_LEL 113..233 CDD:239412 51/124 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48585
OrthoDB 1 1.010 - - D574036at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X349
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.890

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