DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and Tsp42Eo

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_523641.2 Gene:Tsp42Eo / 35625 FlyBaseID:FBgn0033136 Length:219 Species:Drosophila melanogaster


Alignment Length:259 Identity:63/259 - (24%)
Similarity:101/259 - (38%) Gaps:74/259 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VSSCVKYMIFLLNFLFWLFGGLLLAIGVYAFMDKLMDGNGWLRLDTIYDVIFNISLVMIIAGVIV 91
            |..|:::...:.:.|..:.|.|....|||. :||..:|:.   ..|...|...::..:|:||:: 
  Fly     4 VRVCLQWTSVVFSTLTLIVGVLAALAGVYE-LDKFNEGSA---EHTEKFVQLGMAGALILAGLV- 63

  Fly    92 FTVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSL--------------AIICFVFPQYMNSFL 142
                  |||||:..:   :|:..:.|:|...|..|.              |...:|...:|...:
  Fly    64 ------GCLGAIFGS---IKVMVVNLILLLALIASHIWKVSHYNETKQLDATEVYVMDLWMKELV 119

  Fly   143 EYQFTDKIIHSYRDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNCSSPSVERCGVPYSCC 207
            .        |....|         .|||:.|||  :.|:.|::.   .|..        ||.| |
  Fly   120 H--------HGAMQD---------LQQEYECCG--DKGFSDYTS---LNMK--------VPRS-C 153

  Fly   208 INATDISSGLVNIMCGYGVQVRSVAAASKRIWTSGCIEIVRV--WVERNL--YVIAGVALGIAL 267
            .:..|   | ::.:..||   ....||.||.:    ::|.|.  ||...|  |.:.|:.|||.|
  Fly   154 FHTKD---G-IHALYPYG---EGCMAAVKRAY----LQIYRYEKWVHCGLIGYEVVGIILGITL 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 58/235 (25%)
penumbra_like_LEL 132..255 CDD:239411 29/124 (23%)
Tsp42EoNP_523641.2 Tetraspannin 7..210 CDD:278750 62/256 (24%)
tetraspanin_LEL 110..178 CDD:239401 25/105 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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