DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and Tsp42Eh

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster


Alignment Length:208 Identity:45/208 - (21%)
Similarity:95/208 - (45%) Gaps:29/208 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VKYMIFLLNFLFWLFGGLLLAIGVYAFMDKLMDGNGWLRLDTIYDVIFNISLVMIIAGVIVFTVS 95
            ::|::.:::.:..|.|.||:..|.: .:|.|.:....|.:|...|:   .:::.::.|.::...|
  Fly     8 LRYVLCVISGICALGGCLLIWYGAW-LLDSLSEEQRMLGMDHGEDL---AAVLCVLLGTVIVVAS 68

  Fly    96 FAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDKIIHSYRDDSDL 160
            ..|.:...:::..||..|::.|:...|:::.|..|.:...:   .||    .|.:.....|..||
  Fly    69 IFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASR---DFL----PDSLRQGLDDLWDL 126

  Fly   161 Q----NFIDFAQQEFNCCGLSNAGYQDWSKNEYFNCSSPSVERCGVPYSCCINATDISSGLVNIM 221
            |    :.::..::..:|||.::|       .:|.:     :|:...| |||:| .|.:..|...|
  Fly   127 QHEGNSTLNTYEEWLHCCGRNSA-------EDYLH-----LEKMPPP-SCCLN-RDCTKHLNLFM 177

  Fly   222 CGYGVQVRSVAAA 234
            .|..|:.:....|
  Fly   178 TGCEVKFKEYVGA 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 40/188 (21%)
penumbra_like_LEL 132..255 CDD:239411 24/107 (22%)
Tsp42EhNP_523634.1 Tetraspannin 8..220 CDD:278750 45/208 (22%)
tetraspanin_LEL 109..192 CDD:239401 24/103 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442917
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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