DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and Tsp42Ef

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster


Alignment Length:248 Identity:51/248 - (20%)
Similarity:89/248 - (35%) Gaps:59/248 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SSCVKYMIFLLNFLFWLFGGLLLAIGVYAFMDKLMDGNGWLRLDTIYDVIFNISLVMIIAGVIVF 92
            :|.||.:::.|:.|..|...:|::.|:|..:...::..|.|   |.|..:.        .|....
  Fly     4 TSSVKLIVYALDVLCTLLALVLISFGIYVAVSYNLNEIGQL---TAYGYVG--------LGAAAL 57

  Fly    93 TVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDKIIH----S 153
            .|...|.|.|.|||        :|..:.||:.:.|.||......|:....|......:.:    :
  Fly    58 LVVLWGYLSAWREN--------VCCTVTFIIFLCLVIIAQFAVVYLLITQEKTVASNLANALEAT 114

  Fly   154 YRDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNCSSPSVERCGVPYSCCINATDISSGLV 218
            :.::.:....:...|..|.|||..:.  ||:..||            .:|...|....|.|.   
  Fly   115 WEEELNSPGAMSLYQNWFQCCGRGSP--QDYIVNE------------RLPPETCFRNHDKSK--- 162

  Fly   219 NIMCGYGVQVRSVAAASKRIWTSGC-IEIVRVW--VERNLYVIAGVALGIALL 268
                            .:.:..:|| :|....|  :.:...::|.|.:|..||
  Fly   163 ----------------PENLIHTGCRVEFENYWQHLTKIFNILALVLIGFELL 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 44/225 (20%)
penumbra_like_LEL 132..255 CDD:239411 19/129 (15%)
Tsp42EfNP_523632.2 Tetraspannin 7..211 CDD:278750 50/245 (20%)
tetraspanin_LEL 103..181 CDD:239401 17/110 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442929
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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