DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and Tsp29Fa

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster


Alignment Length:264 Identity:68/264 - (25%)
Similarity:119/264 - (45%) Gaps:43/264 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SSCVKYMIFLLNFLFWLFGGLLLAIG-----VYAFMDKLMDGNGWLRLDTIYDVIFNISLVMIIA 87
            ::.|||.:|..|.:|.:.|.:|:|:|     ||......:.|.           .|:|...:|:.
  Fly     8 ANAVKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGK-----------FFSIPTFLIVI 61

  Fly    88 GVIVFTVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDKIIH 152
            |..:..:||.||.|||:||..|:..:|:.|.:.||||::..|..:|.....:..::...|.. ::
  Fly    62 GSFIIIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYS-LN 125

  Fly   153 SYR--DDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNCSSPSVERCGVPYSCCINATDISS 215
            .|.  :.:......|..|.||.|||:::  |.||.      .:.|:.:   :|.|||    ::..
  Fly   126 EYNSINPNATTKLWDDIQDEFECCGVTS--YNDWI------TAFPNGD---LPISCC----NVHV 175

  Fly   216 GLVNIMCGYGVQVRSVAAASKRIWTSGCIEIVRVWVERNLYVIAGVALGIALLQ----LFVIYLA 276
            |.|........| .|||...|    .||::....::..:...:....:.||:||    :|..|:|
  Fly   176 GAVGTFTCNNAQ-SSVADRHK----VGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIA 235

  Fly   277 KTLE 280
            :.::
  Fly   236 REIK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 60/241 (25%)
penumbra_like_LEL 132..255 CDD:239411 27/124 (22%)
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 68/258 (26%)
tetraspanin_LEL 106..210 CDD:239401 27/124 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442928
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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