DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and Tsp3A

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster


Alignment Length:308 Identity:229/308 - (74%)
Similarity:250/308 - (81%) Gaps:24/308 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSNHRYHQGG------------------NYMHPRISTYPHHFSYVSSCVKYMIFLLNFLFWLFGG 47
            |||:||...|                  ..||      ||||:|||.|||||||||||:||||||
  Fly     1 MSNYRYQGAGLGGVGMAGGRGYSGIEVHEVMH------PHHFTYVSQCVKYMIFLLNFVFWLFGG 59

  Fly    48 LLLAIGVYAFMDKLMDGNGWLRLDTIYDVIFNISLVMIIAGVIVFTVSFAGCLGALRENTWLLKL 112
            |||.||||||.||..|.||.:||:..|||..|||||||:||.::|.|||:||:|||||||:|||.
  Fly    60 LLLGIGVYAFRDKWEDANGSVRLENFYDVFLNISLVMILAGTVIFLVSFSGCVGALRENTFLLKF 124

  Fly   113 YSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDKIIHSYRDDSDLQNFIDFAQQEFNCCGLS 177
            |||||||||:|||::||:|||.|||||:|||.|||.|||||||||.|||||||||||||.|||||
  Fly   125 YSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKIIHSYRDDPDLQNFIDFAQQEFKCCGLS 189

  Fly   178 NAGYQDWSKNEYFNCSSPSVERCGVPYSCCINATDISSGLVNIMCGYGVQVRSVAAASKRIWTSG 242
            |:|||||||||||||||||||:||||||||||||||||||||||||||||...|..|:|.|||||
  Fly   190 NSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATDISSGLVNIMCGYGVQNAPVPEATKLIWTSG 254

  Fly   243 CIEIVRVWVERNLYVIAGVALGIALLQLFVIYLAKTLEGQIDLQKSRW 290
            ||||||||.|.|||||||.||||||:||.||||||||||||:||||||
  Fly   255 CIEIVRVWAEHNLYVIAGNALGIALIQLLVIYLAKTLEGQIELQKSRW 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 186/231 (81%)
penumbra_like_LEL 132..255 CDD:239411 105/122 (86%)
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 206/252 (82%)
penumbra_like_LEL 144..267 CDD:239411 105/122 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442894
Domainoid 1 1.000 397 1.000 Domainoid score I2192
eggNOG 1 0.900 - - E1_KOG3882
Homologene 1 1.000 - - H8213
Inparanoid 1 1.050 438 1.000 Inparanoid score I3582
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48585
OrthoDB 1 1.010 - - D1416189at2759
OrthoFinder 1 1.000 - - FOG0003557
OrthoInspector 1 1.000 - - otm42782
orthoMCL 1 0.900 - - OOG6_108299
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6362
SonicParanoid 1 1.000 - - X349
1413.840

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