DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and Tspan10

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_663338.2 Gene:Tspan10 / 208634 MGIID:2384781 Length:332 Species:Mus musculus


Alignment Length:255 Identity:91/255 - (35%)
Similarity:129/255 - (50%) Gaps:15/255 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SSCVKYMIFLLNFLFWLFGGLLLAIGVYAFMDKLMDGNGW---LRLDTIYDVIFNISLVMIIAGV 89
            |:||||:|||.||||.|...|.||.|::....|...|.||   :..|.:        |::::.|:
Mouse    72 SNCVKYLIFLSNFLFSLPSLLALAAGLWGLTVKRSQGIGWGGPVPTDPM--------LMLVLGGL 128

  Fly    90 IVFTVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDKIIHSY 154
            :|..||.:|||||..||:.||..|...:|....||....::.....:.:...|:|.....||| |
Mouse   129 VVSVVSLSGCLGAFCENSCLLHWYCGAVLFCLALEALAGVLMVTLWKPLQDSLKYTLHAAIIH-Y 192

  Fly   155 RDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNCSSPSVERCGVPYSCCINATDISSGLVN 219
            .||.||...:|..|....|||.  ..||||.:|.|||||||.|:.|.:|.|||||..: ...:||
Mouse   193 WDDPDLHFLLDQVQLGLQCCGA--VSYQDWQQNLYFNCSSPGVQACSLPASCCINPQE-DGAVVN 254

  Fly   220 IMCGYGVQVRSVAAASKRIWTSGCIEIVRVWVERNLYVIAGVALGIALLQLFVIYLAKTL 279
            ..||:|........|.:.::..||...::.|:..|...|...|:.:.::|...:.||..|
Mouse   255 TQCGFGALGLDQNVAGQVVFLQGCWPALQEWLRGNTGAIGDCAVAVVMIQGTELLLAACL 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 76/232 (33%)
penumbra_like_LEL 132..255 CDD:239411 44/122 (36%)
Tspan10NP_663338.2 Tetraspannin 74..304 CDD:278750 86/241 (36%)
oculospanin_like_LEL 171..290 CDD:239420 44/122 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1416189at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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