DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and Rom1

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_033099.3 Gene:Rom1 / 19881 MGIID:97998 Length:351 Species:Mus musculus


Alignment Length:344 Identity:76/344 - (22%)
Similarity:121/344 - (35%) Gaps:88/344 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IFLLNFLFWLFGGLLLAIGVYAFMDKLMDGNGWLRLDTIYDVIF------NISLVMIIAGVIVFT 93
            |:||::|..|.|||.|          |..|:..::|..:...:.      .:....:.||.:...
Mouse    21 IWLLSWLLALVGGLTL----------LCSGHLLVQLGHLGTFLAPSCSFPALPQTALAAGTVALG 75

  Fly    94 VSFAGC------LGALRENTW---LLKLYSMCL-----LLFFILEMSLAIICFVFPQYMNSFLEY 144
            ....|.      |.|.:...|   |..|.::..     ||...|.::||:     |..:|..||.
Mouse    76 TGLGGAGASRASLDAAQYPPWRGVLTPLLAVGTAAGGGLLTLALGLALAL-----PVSLNQGLEE 135

  Fly   145 QFTDKIIHSYRDDS-----DLQNFIDFAQQEFNCCGLSNAGYQD-----WSKNEYFNCSSPS-VE 198
            .....:.| |:|..     ..:..:|..|..::|||  ..||:|     |..|.|.:.|... |:
Mouse   136 GLEAALAH-YKDTEVPGRCQAKRLMDELQLRYHCCG--RHGYKDWFGVQWVSNRYLDPSDQDVVD 197

  Fly   199 RC-----------GVPYSCCINATDISSGLVNIMCGYGVQVRSVAAASKRIWTSGCIEIVRVWVE 252
            |.           |||:|||...:........:...|...:......:..:|..||.|::...::
Mouse   198 RIQSNVEGLYLIDGVPFSCCNPHSPRPCLQSQLSDPYAHPLFDPRQPNLNLWAQGCHEVLLEHLQ 262

  Fly   253 RNLYVIAGVALGIALLQLFVI----YLAKTLE-------------------GQIDLQKSRWSXVQ 294
            .....:..:.....|||:.|:    ||...||                   |..|:.|:.|  :|
Mouse   263 GLSGTLGSILAVTLLLQILVLLGLRYLQTALEGLGGVIDGEGEAQGYLFPGGLKDILKTAW--LQ 325

  Fly   295 ---CHHPYLYGYPPCEDDP 310
               .|.|.....||.|:.|
Mouse   326 GGLAHKPAPEEAPPDEEPP 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 57/296 (19%)
penumbra_like_LEL 132..255 CDD:239411 32/144 (22%)
Rom1NP_033099.3 peripherin_like_LEL 128..264 CDD:239415 31/138 (22%)
Tetraspannin <129..274 CDD:278750 31/147 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 329..351 6/16 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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