DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and tsp-14

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001367834.1 Gene:tsp-14 / 180761 WormBaseID:WBGene00006640 Length:451 Species:Caenorhabditis elegans


Alignment Length:285 Identity:89/285 - (31%)
Similarity:148/285 - (51%) Gaps:40/285 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VSSCVKYMIFLLNFLFWLFGGLLLAIGVYAFMDKLMDGNGWLRLDTIYDVIFNISLVMIIAGVIV 91
            :|:|:|:::||||.:.:|.|..:||:|||.|:..       .|...:.|:|.|.::::.|.|..:
 Worm    50 ISACLKWLVFLLNSIVFLVGVGILALGVYLFIKD-------FREVKLVDIILNPAILISIFGFSI 107

  Fly    92 FTVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDK------- 149
            ..|||.|.:||||:|.:|||.::.|:.|.:||.:::.::.|.        |.|..|.:       
 Worm   108 CVVSFFGFMGALRDNIFLLKCFAACVFLSYILVVAVTLVFFT--------LFYTDTTEGLSANWL 164

  Fly   150 ---IIHSYRDDSDLQNFIDFAQQEFNCCGLSN--AGYQDWSKNEYFNC--SSPSVERCGVPYSCC 207
               .:.:|..:.:|...:|..|:...|||:|:  .||:||:.:..|||  |:|..|:||||:|||
 Worm   165 LLYAVKNYHTNRNLAEIMDALQENLECCGVSSIAQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCC 229

  Fly   208 -----INATDISSGLVNIM----CGYGVQVRSVAAASKRIWTSGCIEIVRVWVERN-LYVIAGVA 262
                 ..|...|:.|:..|    |......:........|:|.||::.:|...|.: ::|.|.||
 Worm   230 RKSVISEAAGSSNPLLPAMRSLECWQNALTKRPGDLEHDIYTRGCLQPLRTLFESHAVHVGAFVA 294

  Fly   263 LGIALLQLFVIYLAKTLEGQIDLQK 287
            |.|..:.:.|. |...|..|:|.|:
 Worm   295 LLIVPVCISVC-LTNILAKQVDHQR 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 76/255 (30%)
penumbra_like_LEL 132..255 CDD:239411 40/146 (27%)
tsp-14NP_001367834.1 AcrB <66..>123 CDD:223911 22/63 (35%)
tetraspanin_LEL 145..286 CDD:351888 40/148 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003557
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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