DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp86D and Tsp68C

DIOPT Version :9

Sequence 1:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster


Alignment Length:280 Identity:66/280 - (23%)
Similarity:116/280 - (41%) Gaps:50/280 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FSYVSSCVKYMIFLLNFLFWLFGGLLLAIGVYAFMD-------KLMDGNGWLRLDTI-YDVIFNI 80
            |:|     |:::.|.||||.:.|.||:..|:|.|.|       :|:..:. .||.:: ..::|.|
  Fly     5 FNY-----KFVLNLCNFLFLICGLLLVVSGLYIFSDNKRILLSRLLAASS-DRLSSLPQPLLFYI 63

  Fly    81 SLVMIIAGVIVFTVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMN-SFLEY 144
            :|.:.|||.:....:..|...:.......|.:|.:.:::..:.|..|.:...::|..:. |..|.
  Fly    64 ALGVAIAGFVATLAAVVGFWASCLHTYCFLTIYFLSVVVLLLTESVLCLAITLWPHCLGISLDET 128

  Fly   145 QFTDKIIHSY--RDDSDLQNFIDFAQQEFNCCGL-SNAGYQD--WSKNEYFNCSSPSVERCGVPY 204
            |....:..:|  .......|.:|.||..|.|||: |:..|..  |....|...:.|      ||.
  Fly   129 QMVRSLQSNYGVPGQEQFTNALDLAQVRFGCCGMRSSLDYDTSLWRLQGYGQRNWP------VPL 187

  Fly   205 SCCINATDISSGLVNIMCGYGVQV-------RSVAAASKRI------WTSGCIEIVRVWVERNLY 256
            |||.        |.|  .|:.:..       .|:..:.:|:      .|..|:..:..|......
  Fly   188 SCCF--------LKN--AGHSMAYLDPKPANESMCQSLERLSYERERHTESCLPHLDNWYREQYS 242

  Fly   257 VIAGVALGIALLQLFVIYLA 276
            :..|.:|.:|::: |.:.||
  Fly   243 IFLGASLILAMIE-FCVLLA 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 55/253 (22%)
penumbra_like_LEL 132..255 CDD:239411 31/141 (22%)
Tsp68CNP_729926.1 Tetraspannin 8..267 CDD:278750 64/272 (24%)
tetraspanin_LEL 117..241 CDD:239401 31/139 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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