DRSC/TRiP Functional Genomics Resources

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Protein Alignment SelR and msrb3

DIOPT Version :10

Sequence 1:NP_731523.1 Gene:SelR / 41309 FlyBaseID:FBgn0267376 Length:208 Species:Drosophila melanogaster
Sequence 2:NP_001307307.1 Gene:msrb3 / 415184 ZFINID:ZDB-GENE-040625-74 Length:200 Species:Danio rerio


Alignment Length:157 Identity:76/157 - (48%)
Similarity:99/157 - (63%) Gaps:15/157 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PAATMDNKSEKV---TVNKEELRKRLTPVQYQVTQEAGTERPFTGCYNKHYEKGVYQCIVCHQDL 100
            |||....:|:|.   |..:|||||||||:||.|||:.|||..|||.|..:.|:|.|.|:||...|
Zfish    36 PAALGTCRSKKTWPKTFPEEELRKRLTPMQYHVTQQKGTESAFTGKYVDNKEEGTYHCVVCGAPL 100

  Fly   101 FSSETKYDSGCGWPAFNDVLDKGKVTLHRDASIPGGNILLLIAHPERIRTEVRCARCNAHMGHVF 165
            |.||.|:|||.|||:|.|:::|..:....|.|..        .|    |.|..|::|.||:||:|
Zfish   101 FMSEKKFDSGSGWPSFFDLINKDAIAQTDDFSYG--------MH----RVETTCSQCGAHLGHLF 153

  Fly   166 EDGPKPTRKRYCINSASIEFVNADPAT 192
            :|||:||:|||||||||:.|...:.||
Zfish   154 DDGPRPTKKRYCINSASLSFQPKNSAT 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SelRNP_731523.1 MsrB 46..189 CDD:439999 71/145 (49%)
msrb3NP_001307307.1 MsrB 46..176 CDD:439999 70/141 (50%)

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