DRSC/TRiP Functional Genomics Resources

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Protein Alignment SelR and msrb2

DIOPT Version :10

Sequence 1:NP_731523.1 Gene:SelR / 41309 FlyBaseID:FBgn0267376 Length:208 Species:Drosophila melanogaster
Sequence 2:NP_998086.2 Gene:msrb2 / 405857 ZFINID:ZDB-GENE-040426-2304 Length:184 Species:Danio rerio


Alignment Length:192 Identity:71/192 - (36%)
Similarity:96/192 - (50%) Gaps:44/192 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SARHALRRTRIFAIPRFFADS-------RQDSDNPDKRYSGPAATMDNKSEKVTVNKEELRKRLT 62
            :.:..|.:.||||..|..:.|       |.|...                        :.:::|:
Zfish    21 TGKSVLPQKRIFAGIRLISSSTGLQSLTRYDQST------------------------DWQRKLS 61

  Fly    63 PVQYQVTQEAGTERPFTGCYNKHYEKGVYQCIVCHQDLFSSETKYDSGCGWPAFNDVLDKGKVTL 127
            |.||.||:|.|||.||:|.|..|.|.|:|.|:.|...|||||.|||:|.|||:|.:    ...|.
Zfish    62 PEQYVVTREKGTEVPFSGIYLNHNEVGMYHCVCCDSPLFSSEAKYDAGAGWPSFCE----AHGTW 122

  Fly   128 HRDASIPGGNILLLIAHPER----IRTEVRCARCNAHMGHVFEDGPKPTRKRYCINSASIEF 185
            .:|.|  ..||   :..|:.    ..|||.|..|:||:||||||||.||.:|:||||.::.|
Zfish   123 EKDES--HANI---VRRPDNSLGSTGTEVICKHCDAHLGHVFEDGPDPTGQRFCINSVALNF 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SelRNP_731523.1 MsrB 46..189 CDD:439999 62/144 (43%)
msrb2NP_998086.2 MsrB 55..184 CDD:439999 62/134 (46%)

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