back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG4565 and setd1b

DIOPT Version :10

Sequence 1:	NP_001097743.1	Gene:	CG4565 / 41303	FlyBaseID:	FBgn0037841	Length:	269	Species:	Drosophila melanogaster
Sequence 2:	NP_001072649.1	Gene:	setd1b / 780106	XenbaseID:	XB-GENE-5842344	Length:	1956	Species:	Xenopus tropicalis

Alignment Length:	161	Identity:	43/161 - (26%)
Similarity:	77/161 - (47%)	Gaps:	19/161 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly   102 NRLVYSGPRKHLEIFDSPVYGSKGLRTTAKITKGGYICEYAGELL--TVPEARSRLHDNEKLGLM 164
            |:|.:.  :|.|....|.:: ..||.....|.....:.||.|:.:  .:.:.|.:.:::|.:| .
Frog  1810 NQLKFR--KKKLRFCKSHIH-DWGLFAMEPIIADEMVIEYVGQNIRQVIADMREKRYEDEGIG-S 1870

  Fly   165 NYILVLNEYTSDKKQQVTIVDPSRRGNIGRYLNHSCEPNCHIAAVRIDCPIPKIGIFAARDIAAK 229
            :|:.        :....||:|.::.||..|::||||.|||:...:.::.. .||.|::.:.|...
Frog  1871 SYMF--------RVDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQ-KKIVIYSKQYINVN 1926

  Fly   230 EELCFHYGGEGQYKKMTGGKTCLCGASKCTG 260
            ||:.:.|....:..|:    .|||||..|.|
Frog  1927 EEITYDYKFPIEDVKI----PCLCGAENCRG 1953

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.