DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4565 and Nsd2

DIOPT Version :10

Sequence 1:NP_001097743.1 Gene:CG4565 / 41303 FlyBaseID:FBgn0037841 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001178481.2 Gene:Nsd2 / 680537 RGDID:1307955 Length:1365 Species:Rattus norvegicus


Alignment Length:234 Identity:74/234 - (31%)
Similarity:107/234 - (45%) Gaps:59/234 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 CHCKGACENSEVCAHGGQYEFTEDGSELILRNSANPVIECN-DMC---KCCRNTCSNRLVYSGPR 110
            |:||...||.  |.         ..||.:.|..   :.||: .:|   :.|:|.|..:..|  |.
  Rat  1016 CNCKPTDENP--CG---------SDSECLNRML---MFECHPQVCPAGEYCQNQCFTKRQY--PE 1064

  Fly   111 KHLEIFDSPVYGSKGLRTTAK--ITKGGYICEYAGELLTVPEARSRL---HDNEKLGLMNYILVL 170
            ..:...|     .||....||  |.||.::.||.|||:...|..:|:   |:|:    :.:..:|
  Rat  1065 TKIIKTD-----GKGWGLVAKRDIRKGEFVNEYVGELIDEEECMARIKYAHEND----ITHFYML 1120

  Fly   171 NEYTSDKKQQVTIVDPSRRGNIGRYLNHSCEPNCHIAAVRIDCPIPKIGIFAARDIAAKEELCFH 235
               |.||.:   |:|...:||..|::||||:|||......::.. .::|:||..||.|..||.|:
  Rat  1121 ---TIDKDR---IIDAGPKGNYSRFMNHSCQPNCETLKWTVNGD-TRVGLFAVCDIPAGTELTFN 1178

  Fly   236 Y-----GGEGQYKKMTGGKT-CLCGASKCTGFM---PNT 265
            |     |.|         || |.||||.|:||:   |.|
  Rat  1179 YNLDCLGNE---------KTVCRCGASNCSGFLGDRPKT 1208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4565NP_001097743.1 SET_SETMAR 16..267 CDD:380942 74/234 (32%)
Nsd2NP_001178481.2 PWWP_NSD2_rpt1 220..347 CDD:438990
HMG-box_NSD2 452..507 CDD:438807
TNG2 <546..710 CDD:227367
PHD1_NSD1_2 669..711 CDD:277118
PHD_SF 716..762 CDD:473978
PHD3_NSD2 763..816 CDD:277124
PHD_SF 833..873 CDD:473978
PWWP_NSD2_rpt2 879..974 CDD:438993
AWS 1012..1062 CDD:197795 15/59 (25%)
SET_NSD2 1062..1203 CDD:380988 57/167 (34%)
PHD5_NSD2 1241..1283 CDD:277130
C5HCH 1282..1327 CDD:465605
Blue background indicates that the domain is not in the aligned region.

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