DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4565 and setd1ba

DIOPT Version :10

Sequence 1:NP_001097743.1 Gene:CG4565 / 41303 FlyBaseID:FBgn0037841 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001038599.2 Gene:setd1ba / 567970 ZFINID:ZDB-GENE-050309-289 Length:1844 Species:Danio rerio


Alignment Length:138 Identity:38/138 - (27%)
Similarity:68/138 - (49%) Gaps:16/138 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 GLRTTAKITKGGYICEYAGELL--TVPEARSRLHDNEKLGLMNYILVLNEYTSDKKQQVTIVDPS 187
            ||.....|.....:.||.|:.:  .:.:.|.:.:::|.:| .:|:.        :....||:|.:
Zfish  1718 GLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIG-SSYMF--------RVDHDTIIDAT 1773

  Fly   188 RRGNIGRYLNHSCEPNCHIAAVRIDCPIPKIGIFAARDIAAKEELCFHYGGEGQYKKMTGGKTCL 252
            :.||..|::||||.|||:...:.::.. .||.|::.:.|...||:.:.|....:.:|:    .||
Zfish  1774 KCGNFARFINHSCNPNCYAKVITVESQ-KKIVIYSRQPINVNEEITYDYKFPIEDEKI----PCL 1833

  Fly   253 CGASKCTG 260
            |||..|.|
Zfish  1834 CGAENCRG 1841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4565NP_001097743.1 SET_SETMAR 16..267 CDD:380942 38/138 (28%)
setd1baNP_001038599.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..58
RRM_Set1B 136..228 CDD:409965
PABP-1234 <145..333 CDD:130689
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..288
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..562
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 838..871
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 890..1108
PHA03247 <1136..1500 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1160..1341
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1367..1499
N-SET 1556..1699 CDD:463344
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1647..1678
RxxxRR motif. /evidence=ECO:0000250|UniProtKB:P38827 1678..1683
SET_SETD1 1693..1840 CDD:380946 36/135 (27%)
Blue background indicates that the domain is not in the aligned region.

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