DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4565 and trx

DIOPT Version :10

Sequence 1:NP_001097743.1 Gene:CG4565 / 41303 FlyBaseID:FBgn0037841 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster


Alignment Length:180 Identity:55/180 - (30%)
Similarity:88/180 - (48%) Gaps:35/180 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 RNTCSN-------RLVYSGPRKHLEIFDSPVYGSKGLRTTAKITKGGYICEYAGELL--TVPEAR 152
            |.|.||       |.:....:.::.:|.|.::| :||..|..|..|..:.||||||:  |:.:.|
  Fly  3567 RGTGSNLPMAMKYRTLKETYKDYVGVFRSHIHG-RGLYCTKDIEAGEMVIEYAGELIRSTLTDKR 3630

  Fly   153 SRLHDNEKLGLMNYILVLNEYTSDKKQQVTIVDPSRRGNIGRYLNHSCEPNCHIAAVRIDCPIPK 217
            .|.:|:..:|.  |:..:::.        .:||.:.|||..|::||.|||||:...|.|      
  Fly  3631 ERYYDSRGIGC--YMFKIDDN--------LVVDATMRGNAARFINHCCEPNCYSKVVDI------ 3679

  Fly   218 IG-----IFAARDIAAKEELCFHYGGEGQYKKMTGGKTCLCGASKCTGFM 262
            :|     |||.|.|...|||.:.|....:.:|:    .|.||:.:|..::
  Fly  3680 LGHKHIIIFALRRIVQGEELTYDYKFPFEDEKI----PCSCGSKRCRKYL 3725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4565NP_001097743.1 SET_SETMAR 16..267 CDD:380942 55/180 (31%)
trxNP_476769.1 NR_DBD_like 762..>856 CDD:413390
PRK13914 <1006..>1224 CDD:237555
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1890..1937 CDD:461787
FYRC 3388..3476 CDD:197781
SET_KMT2A_2B 3575..3726 CDD:380947 51/172 (30%)
Blue background indicates that the domain is not in the aligned region.

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