DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4565 and egg

DIOPT Version :10

Sequence 1:NP_001097743.1 Gene:CG4565 / 41303 FlyBaseID:FBgn0037841 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_611966.3 Gene:egg / 37962 FlyBaseID:FBgn0086908 Length:1262 Species:Drosophila melanogaster


Alignment Length:388 Identity:88/388 - (22%)
Similarity:128/388 - (32%) Gaps:144/388 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DDYEHPDGLDYILE-----SVLMPSDGSKEFKFLA----DEYNSVLLNP---------------- 49
            |:::....|..:.|     |::..:|.||..:.:|    :.|::.|..|                
  Fly   875 DNFDFTPDLKCLAEYSIDPSIVKDTDISKGQEKMAIPLVNYYDNTLPPPCTYAKQRIPTEGVHLN 939

  Fly    50 --------CHCKGACENSEVCA------HGGQY-----EFTEDGSELILRNSANP--VIECNDMC 93
                    |.|:..|.:...||      .|.:|     ...|.|.:....:...|  :.|||..|
  Fly   940 LDEEFLLCCDCEDDCSDKSKCACWQLTVAGVRYCNPKKPIEEIGYQYKRLHEHVPTGIYECNSRC 1004

  Fly    94 KCCRNTCSNRLVYSGPRKHLEIFDSPVYGSKGLRTTAKITKGGYICEYAGELLTVPEARSRLHD- 157
            ||.:| |.||:|.......|::|.:...| .|||....|.||.:||.|||.|||...|.....| 
  Fly  1005 KCKKN-CLNRVVQFSLEMKLQVFKTSNRG-WGLRCVNDIPKGAFICIYAGHLLTETMANEGGQDA 1067

  Fly   158 -NEKLGLMNYILVLNE----YTSD----------------------------------------- 176
             :|....::||.|..:    |.|:                                         
  Fly  1068 GDEYFADLDYIEVAEQLKEGYESEVDHSDPDAEEDNGGPDAEDDDDFRPNYHYQRKIKRSSRSGS 1132

  Fly   177 -----------------------------------------KKQQVTIVDPSRRGNIGRYLNHSC 200
                                                     |.:...|:|....||:|||.||||
  Fly  1133 TQNSSTQSSELDSQERAVINFNPNADLDETVRENSVRRLFGKDEAPYIMDAKTTGNLGRYFNHSC 1197

  Fly   201 EPNCHIAAVRI---DCPIPKIGIFAARDIAAKEELCFHYGGEGQYKKMTGGKT--CLCGASKC 258
            .||..:..|.:   |...|.:..|:|..|.:..||.::|..|   ..:..||.  |.|||..|
  Fly  1198 SPNLFVQNVFVDTHDLRFPWVAFFSAAHIRSGTELTWNYNYE---VGVVPGKVLYCQCGAPNC 1257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4565NP_001097743.1 SET_SETMAR 16..267 CDD:380942 87/382 (23%)
eggNP_611966.3 Tudor_SETDB1_rpt1 532..622 CDD:410453
Tudor_SETDB1_rpt2 630..684 CDD:410548
HMT_MBD 823..879 CDD:238689 1/3 (33%)
SET_SETDB1 900..1262 CDD:380915 84/363 (23%)
Blue background indicates that the domain is not in the aligned region.

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