DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4565 and Suv39h2

DIOPT Version :10

Sequence 1:NP_001097743.1 Gene:CG4565 / 41303 FlyBaseID:FBgn0037841 Length:269 Species:Drosophila melanogaster
Sequence 2:XP_038951911.1 Gene:Suv39h2 / 364785 RGDID:1306969 Length:511 Species:Rattus norvegicus


Alignment Length:285 Identity:84/285 - (29%)
Similarity:135/285 - (47%) Gaps:50/285 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DY----EHPDGLDYILESVLM---PSDGSKEFKFLADEYN---SVLLNP-----CHCKGACENSE 60
            ||    ::..|:.::..:|.:   |||    |.:: :||.   .:.||.     |.|.. |...:
  Rat   243 DYLNRRKNHKGMIFVENTVDLEGPPSD----FYYI-NEYRPAPGITLNSEATFGCSCTN-CFFEK 301

  Fly    61 VCAHGGQYEFTEDGSELILRNSANPVIECNDMCKCCRNTCSNRLVYSGPRKHLEIFDSPVYGSKG 125
            .|..........:.:..|......|:.|||..|:|..: |.||:|..|.:..|.||.:......|
  Rat   302 CCPAEAGVVLAYNKNRQIKIQPGTPIYECNSRCRCGPD-CPNRIVQKGTQYSLCIFRTSNGCGWG 365

  Fly   126 LRTTAKITKGGYICEYAGELLTVPEA--RSRLHDNEKLGLMNYILVLNEYTSDKKQQVTIVDPSR 188
            ::|..||.:..::.||.||::|..||  |.:|:||:.:   .|:..| :|.||:    ..||.:|
  Rat   366 VKTLVKIKRMSFVMEYVGEVITSEEAERRGQLYDNKGI---TYLFDL-DYESDE----FTVDAAR 422

  Fly   189 RGNIGRYLNHSCEPNCHIAAV---RIDCPIPKIGIFAARDIAAKEELCFHY--GGEGQY------ 242
            .||:..::||||:||..:.:|   .:|..:|:|.:|:.|.|.|.|||.|.|  .|.|:.      
  Rat   423 YGNVSHFVNHSCDPNLQVFSVFIDNLDTRLPRIALFSTRTIKAGEELTFDYQMKGSGELSSDSID 487

  Fly   243 -----KKMTGGKTCLCGASKCTGFM 262
                 |::.  ..|.|||..|.|::
  Rat   488 YSPARKRVR--TQCKCGAETCRGYL 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4565NP_001097743.1 SET_SETMAR 16..267 CDD:380942 82/276 (30%)
Suv39h2XP_038951911.1 CD_SUV39H1_like 148..196 CDD:349289
SET_SUV39H2 268..510 CDD:380930 79/258 (31%)
Blue background indicates that the domain is not in the aligned region.

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