DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4565 and Set2

DIOPT Version :10

Sequence 1:NP_001097743.1 Gene:CG4565 / 41303 FlyBaseID:FBgn0037841 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster


Alignment Length:283 Identity:73/283 - (25%)
Similarity:116/283 - (40%) Gaps:65/283 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDE--SETAPNDDYEHPDGLDYILESVLMPSDGSKEFKFLADEYNSVLLNPCHCKGACENSEV-- 61
            |||  :|.|         .::.|.|..|. |:|...|:.|.:.:..     |..:.:.||:|:  
  Fly  1312 MDEQLAELA---------NIEAINEQFLR-SEGLNTFQLLKENFYR-----CARQVSQENAEMQC 1361

  Fly    62 -CAHGGQYE---FTEDGSELILRNSANPVIECNDMCKCCRN--TCSNRLVYSGPRKHLEIFDSPV 120
             |...|..|   ....|:..|.|..   :|||..:|.   |  .|:|:...........:|.:. 
  Fly  1362 DCFLTGDEEAQGHLSCGAGCINRML---MIECGPLCS---NGARCTNKRFQQHQCWPCRVFRTE- 1419

  Fly   121 YGSKGLRTTAK--ITKGGYICEYAGELLTVPEARSRLHDNEKLGLMNYILVLNEYTSDKKQQV-- 181
              .||...||:  |..|.:|.||.||::...|...|.|               .|:.|:.:..  
  Fly  1420 --KKGCGITAELLIPPGEFIMEYVGEVIDSEEFERRQH---------------LYSKDRNRHYYF 1467

  Fly   182 ------TIVDPSRRGNIGRYLNHSCEPNCHIAAVRIDCPIPKIGIFAARDIAAKEELCFHYGGEG 240
                  .::|.:.:|||.||:||||:||.......::..: :||.|:.:.|...||:.|.|    
  Fly  1468 MALRGEAVIDATSKGNISRYINHSCDPNAETQKWTVNGEL-RIGFFSVKPIQPGEEITFDY---- 1527

  Fly   241 QYKKM-TGGKTCLCGASKCTGFM 262
            ||.:. ...:.|.|.|:.|.|::
  Fly  1528 QYLRYGRDAQRCYCEAANCRGWI 1550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4565NP_001097743.1 SET_SETMAR 16..267 CDD:380942 68/266 (26%)
Set2NP_572888.2 valS <709..832 CDD:237855
AWS 1358..1410 CDD:197795 14/57 (25%)
SET_SETD2 1410..1551 CDD:380949 44/164 (27%)
WW 2014..2043 CDD:459800
SRI 2266..2355 CDD:462404
Blue background indicates that the domain is not in the aligned region.

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